Flavobacterium nakdongensis: RF683_08075
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Entry
RF683_08075 CDS
T10681
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RF683_08075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fnd03021
]
RF683_08075
03400 DNA repair and recombination proteins [BR:
fnd03400
]
RF683_08075
Enzymes [BR:
fnd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RF683_08075
Transcription machinery [BR:
fnd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RF683_08075
DNA repair and recombination proteins [BR:
fnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RF683_08075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WMW77439
LinkDB
All DBs
Position
complement(1811486..1812478)
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVKID
GVEHEFSTISGVVEDVTEIILNLKQVRFKRQIEDIDNESVSISLSGKDQITAGDFQKFIS
GFQVLNPELVICNLDSKTNINMELTIEKGRGYVPAEENKKQNAPIGTIFTDSIYTPVKNV
KYSIENYRVEQKTDYEKLVFEIITDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVAVKGLTFGMDLTKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcaaaagcccgataaagttatcatgatcgattcaaccgatttt
gaaggtaaatttgaatttagacctttagaacctggttatggattgactgttggtaatgca
ctaagaagagttttactttcttctcttgaaggttttgctataacgtctgttaaaattgat
ggtgtggaacatgagttctctactatttcaggtgttgtagaagatgtaacagaaattatc
ttaaacttaaaacaagtacgttttaaacgtcaaattgaggatattgataatgagtctgtt
tctatttctttatcaggaaaagatcaaataactgcaggtgatttccaaaaatttatttct
ggttttcaagttttaaaccctgaattggtaatttgtaatcttgatagtaaaactaacatc
aacatggaacttactatcgaaaaaggtagaggttatgttccagctgaagagaataaaaaa
caaaatgctccaattggtaccatctttacagactctatctatacgcctgtaaaaaatgtg
aagtattcaattgaaaactatcgtgtggaacaaaaaactgattatgaaaaattagttttt
gaaatcattactgatggttctattcatccaaaagatgcattaaccgaagcagctaaaact
ctaattcatcattttatgttattctcagatgagagaattacattagaggctgatgaaatt
gctcaaactgaatcttacgatgaagaatctttacacatgagacagttgttaaaaactaaa
cttgtagatatggatttatcagtaagagctttaaattgtttaaaagcggctgaagttgat
acgctaggagacttagtttctttcaataaaaatgacttaatgaaattccgtaatttcggt
aaaaaatctttaacagaattagacgaattagttgctgttaaaggacttactttcggaatg
gacttaacaaaatacaagttagataaagaataa
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