Flavobacterium nakdongensis: RF683_08355
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Entry
RF683_08355 CDS
T10681
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd00260
Glycine, serine and threonine metabolism
fnd00630
Glyoxylate and dicarboxylate metabolism
fnd00670
One carbon pool by folate
fnd00785
Lipoic acid metabolism
fnd01100
Metabolic pathways
fnd01110
Biosynthesis of secondary metabolites
fnd01200
Carbon metabolism
Module
fnd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RF683_08355 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RF683_08355 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RF683_08355 (gcvP)
00670 One carbon pool by folate
RF683_08355 (gcvP)
Enzymes [BR:
fnd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RF683_08355 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Motif
Other DBs
NCBI-ProteinID:
WMW77495
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All DBs
Position
1854794..1857637
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AA seq
947 aa
AA seq
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MRTDAFALRHLGPRETDLNHMLNTIGVASLDQLIFETIPADIRLKKELELDTPMTEFEYL
SHIQELGKKNKVFKSYIGLGYHPAVIPAVIQRNIFENPGWYTAYTPYQAEIAQGRLEAIL
NYQTTIIELTGMEIANASLLDEGTAAAEAMALLFDVRSRDQKKNNVDKFYVSEEILPQTL
SVLQTRATPKGIELVVGNHETFDFSSDFFGAMLQYPGKYGQVNDYAGFIAKAHTNEIKVA
VAADLLSLAKLTPPGEMGADVVVGTSQRFGIPMGYGGPHAAYFATKEEHKRSMPGRIIGV
TIDANGNRALRMALGTREQHIKREKATSNICTAQVLLAVMAGMYAVYHGPKGLKYIANKV
HASAVTLAEALNQLGVYQTNTAFFDTLLVKADASKVKAVAEKNEVNFFYVDGETISISLN
ETTSLADLNQIVSIFAEALGKSNVTVSELANESAIPADLVRTSSFLQHEVFNNHHSESQL
MRYIKKLERKDLSLNHSMISLGSCTMKLNAAAEMLPLSMANWNSIHPFAPVEQAEGYQIM
LKKLEQQLNVVTGFAGTTLQPNSGAQGEYAGLMTIRAYHLSRGDHHRNVCLIPSSAHGTN
PASAAMAGMEIIVTKTTPEGNIDVEDLRTRAIEYKDRLSCLMVTYPSTHGVFESSIIEIT
NLIHENGGLVYMDGANMNAQVGLTNPATIGADVCHLNLHKTFAIPHGGGGPGVGPICVNE
KLVPFLPTNPIIPTGGNQAISAISAAPYGSALVCLISYGYISMLGSEGLTNATKYAILNA
NYMKARLEDHYPVLYSGEMGRAAHEMILDCRAFKQQGVEVTDIAKRLMDYGFHAPTVSFP
VAGTLMIEPTESEDVAELDRFCDAMIAIRKEIAAVTADNHNTVLHNAPHTQAMLTADVWN
FPYTREQAAFPLEYIAENKFWPSVRRVDDAYGDRNLVCSCAPIEAYM
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagatgcatttgctttacgccatttaggtcctagagaaacagacttaaatcac
atgttaaacacaattggtgtagcttcattagaccaattaatttttgagaccatccccgct
gatattcgtcttaaaaaagaattagaattagacacacctatgaccgagtttgagtatttg
tctcacattcaagaattaggtaaaaaaaataaagttttcaaatcatatatcggtttaggg
tatcaccctgctgttattcctgccgtaattcaaagaaatatttttgaaaacccaggttgg
tacaccgcttatacaccctaccaagcagaaatcgcacaaggtcgtttggaagctatttta
aactatcaaactaccattatagaattaacaggaatggaaatcgctaatgcttcattgctt
gatgaagggactgcagcagccgaagcaatggctttgttatttgatgtgcgttctcgtgac
caaaagaaaaacaacgtagacaaattctacgtttcagaagaaatattacctcaaacctta
tcggtattacaaacacgcgctactccaaaaggaatagaattagtggttggaaatcatgaa
acatttgatttctcctctgatttctttggagccatgttgcaatatcctgggaaatatggt
caagttaatgactatgctggttttattgccaaagcacatactaacgaaataaaagttgct
gtagcagcggatcttttatctttagccaaattaactcctccgggagaaatgggagctgat
gtagtggtaggaacttcacaacgatttgggattccaatgggttatggtggcccacacgcg
gcttattttgcaaccaaagaagagcacaaacgatcaatgccgggaagaatcattggtgta
accattgatgccaatggaaatagagctttacgaatggctttgggaactcgtgagcaacac
atcaaacgtgaaaaagcaacttcaaacatctgtactgctcaagttttattagcggttatg
gctggaatgtacgctgtttaccacggaccaaaaggattaaaatacattgccaataaagtg
catgcttcggcagtgactttggcggaagccttaaatcaattaggtgtttaccaaaccaat
accgctttcttcgatacccttttagtaaaagcggatgcttcgaaagtaaaagccgtagca
gagaaaaacgaagtaaacttcttttatgtagatggcgaaaccatttcaatttcgttgaat
gaaaccacttcattagcagatttaaaccaaattgtatccatttttgcggaagcattagga
aagtcaaatgtaacagttagcgaattagctaatgagtcagcaattcctgctgatttggtt
agaactagctctttcttgcaacacgaagtatttaacaaccatcattctgaaagtcagttg
atgcgttatatcaaaaaattagagcgcaaagatttgtccttgaaccattccatgatttct
ttaggttcttgtacgatgaaattgaacgctgcagccgaaatgttgcctttgtcaatggct
aattggaacagcattcacccgtttgctcctgttgaacaagcagaagggtaccaaatcatg
ttgaaaaaattagagcaacaattgaatgtagttactgggtttgctggaactactttgcaa
ccaaattcgggagcacaaggggaatatgctggtttaatgaccatcagagcttatcatttg
tcaagaggagaccaccacagaaatgtgtgcttaattccttcttcggcacacggaaccaat
ccagcatcggcagcgatggcgggaatggaaattatcgtaaccaaaactactccagaagga
aatattgatgtagaagatttacgcaccagagccattgagtacaaagaccgtttgtcttgt
ttaatggtaacctatccttctacacatggtgtttttgaaagttcgattatcgaaatcaca
aatctaattcacgaaaatggtggattagtctatatggatggtgccaatatgaatgcacaa
gtaggattaactaatcctgctactattggcgctgacgtttgtcacttgaacttacacaaa
accttcgctattcctcatggtggtggtggccccggtgttggtccaatttgtgtcaacgaa
aaattagtgccgtttttaccgacaaatccaattattccaacaggtggaaatcaagccatt
tcagccatttcagcagcaccttacggatcggctttagtgtgtttaatttcgtatggctac
atttcgatgttaggctccgaaggattgaccaatgcgaccaagtatgcgattttgaacgct
aattatatgaaagcgcgtttagaagaccactaccctgtattgtattcaggtgaaatggga
agagcggctcacgaaatgattttggattgtcgtgcatttaaacaacaaggagttgaagtt
acagatattgccaaacgtttaatggattatggtttccacgctccaacggtttccttccca
gttgcaggaactttgatgattgaacctaccgaatcggaagatgtagcagaattagaccgt
ttttgcgatgcgatgattgctatcagaaaagaaattgcagctgtaactgctgacaatcac
aatacggttttacacaatgctcctcatacacaagcgatgcttacggctgatgtttggaac
ttcccatacaccagagagcaagccgcttttccattggaatacattgcagaaaataaattt
tggccaagtgtacgtcgtgtggatgatgcttacggagatcgaaatttagtttgttcttgt
gcgccaattgaagcctatatgtaa
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