Flavobacterium nakdongense: RF683_09025
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Entry
RF683_09025 CDS
T10681
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
fnd Flavobacterium nakdongense
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
RF683_09025
SSDB
Ortholog
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GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_AprE
BSH_CusB
Beta-barrel_YknX
BSH_CzcB
CzcB_C
YknX_C
BSH_LcnD
RND-MFP_C
HH_EMRA
Beta-barrel_RND_2
HH_YBHG
Biotin_lipoyl
HH_MFP_RND
BSH_YhbJ
HH_CzcB
BSH_YknX
PTS_EIIA_1
PASTA
Cytochrom_B562
Motif
Other DBs
NCBI-ProteinID:
WMW77626
UniProt:
A0ABY9R9I6
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Position
complement(2005801..2007117)
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AA seq
438 aa
AA seq
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MSKKKIIILSSVALVAIFTLIVLKKKGVIGSNDDSKVVETAKVESMTIIETVSATGKIQP
EVEVKISSEVSGEVIALNVKEGQQVKKGDLLVKINPDIYESGVNRTVASLSTTKAGVNQA
DAQVKEAKANYDRNKKLFDKGVISKAEWDRIVSAYEVATAAKQSAYYQMKSASANVTEAN
DNLKRTSIFAPADGTISKLDVELGERVMGTQGMASTELMRIANLNNMEVEVDVNENDIVK
VNIGDSAKVEVDAYLKRKFEGIVTSISNSATSATTADQVTNFKVKVRLSKESYQDLLAGK
PTNFSPFRPGMTATVDIITKRSVNVLGVPIGAVVIKEDTTATKKDIVAELEKEEAKEKGK
APKKDEKFECVFVKIGDKAKLKVVKTGIQDDTNIEIISGLKKGDEIIVGPYSMVSKELMP
NDKVRQETQKDKDKKAKS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaagaaaattataatcttaagtagtgtagccttagtagctatctttacttta
attgttcttaaaaagaaaggtgttattggtagcaatgatgatagcaaagttgtagaaaca
gcaaaagttgaatcaatgacaataatagaaaccgtttctgctacaggaaaaattcaacca
gaagtagaagttaaaatttcttctgaagtttcgggtgaagttattgctttaaatgttaaa
gaaggacaacaggttaaaaaaggcgatttacttgtgaaaataaaccccgatatttatgaa
tcaggagtaaatagaacagttgcttctttgtcaactacaaaagcaggtgttaatcaagca
gatgcgcaagttaaagaagcaaaagcaaattacgatagaaataaaaaactatttgataaa
ggtgtaatttcaaaagctgaatgggaccgaattgtatctgcttatgaagtagcaacagca
gcaaaacaatcggcatattatcaaatgaaatctgcatcggctaatgttactgaagcgaat
gataatttaaaaagaacctcaatttttgcaccagctgatggtactatttctaaattggat
gtagaacttggtgaacgcgtaatgggtacacaagggatggcaagtacagaattaatgcgt
attgctaatctaaacaacatggaagtagaagtagatgtaaatgaaaatgatatcgttaaa
gtgaatattggagattctgcaaaagttgaagttgatgcctatttaaaacgaaaatttgaa
ggtattgtaacaagtatttcaaactcggctactagcgctaccacagcagaccaagtaact
aattttaaagtaaaagtgcgtttatcaaaagaatcttatcaagatttattagcaggtaaa
ccaacaaatttttcaccatttagaccaggtatgacggctactgtagacattatcactaaa
cgaagtgttaatgttttaggcgtgccaattggagcggtagtgataaaagaagatacaacg
gcaaccaagaaagacattgttgcagaacttgaaaaagaagaggctaaagaaaaaggtaaa
gcccctaaaaaagacgaaaagtttgagtgtgtgtttgtaaaaataggggataaggcaaaa
ttaaaagttgtaaagacaggtattcaggacgacaccaatattgaaataatttctggcttg
aaaaaaggagacgaaataattgtagggccttattctatggtaagcaaagagttgatgcca
aatgataaagtgcgtcaagaaactcagaaagacaaagacaaaaaagcgaaaagttag
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