Flavobacterium nakdongensis: RF683_09310
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Entry
RF683_09310 CDS
T10681
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd03030
DNA replication
fnd03410
Base excision repair
fnd03420
Nucleotide excision repair
fnd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RF683_09310 (polA)
03410 Base excision repair
RF683_09310 (polA)
03420 Nucleotide excision repair
RF683_09310 (polA)
03440 Homologous recombination
RF683_09310 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnd03032
]
RF683_09310 (polA)
03400 DNA repair and recombination proteins [BR:
fnd03400
]
RF683_09310 (polA)
Enzymes [BR:
fnd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RF683_09310 (polA)
DNA replication proteins [BR:
fnd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RF683_09310 (polA)
DNA repair and recombination proteins [BR:
fnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RF683_09310 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RF683_09310 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
RNase_H_2
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WMW77677
LinkDB
All DBs
Position
2075974..2078832
Genome browser
AA seq
952 aa
AA seq
DB search
MSQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIIGFMNSLMDVIKREKPDHLAVA
FDKGGSNYRLEMFTDYKANRDETPEAIKIAVPYIQELLKAMHIPIIEKAGFEADDLIGTL
AKQAEKQGYKVFMVTPDKDFGQLVSENIFMYRPARMGNDIEIWGVEEVKAKFEIEHPLQV
IDFLGMMGDAVDNIPGLPGVGEKTAKKLLAEFGSMENLLANTDKLKGALKEKIEANKEKG
ILSKKLATILLDCPVTFDEVDYELSKPDVEKTDVLFQELEFRQMKAQFDKLFGTGKEYDE
IDNSALTSTNIEEEKIKKVAPKKTNESQMDLFGFSEDESNENSANSYYATLENTTHFYQI
VQGEMPTQLFVQNLLQQQSVCFDTETTGLDALNATLVGMSFSWEKGKGYYVPFPENQEET
LILLQKFKPFFESESIEKIGQNIKYDLKVLHNYGIVVKGPLFDTMIAHYLINPDMRHNMD
VLAETYLKYSPKSIETLIGKKGKGQKSMRDVSLEDIKEYAAEDADVTLQLKEHFQPILEK
VGTKKLFDKIEIPLVQVLADMEQEGVQLDVSFLQALSTEMQIEISNLEQKIYETAGEKFN
LASPKQLGDILFDKLKIGGTKQKKTKTGQYATGEEVLSYLVNEHQIVKDILEWRQLIKLK
STYVDALPNQVNPKTNRVHTDYMQAVAATGRLSSNNPNLQNIPIRSERGRQIRKAFVARD
ENYVLLSADYSQIELRIIAALSGEENMIKAFQNNEDIHRSTAAKVFNVPLEDVTTAQRSH
AKTVNFGIIYGVSAFGLSNQTNLSRKESADLIEAYYQTYPKLKAYMANQVNFARENGYVE
TISGRRRYLKDINSANAIVKGGAERNAVNAPIQGSAADIIKIAMIHIHQKLSAEKWQSKM
LLQVHDELVFDAHITELEQLKTMIKHEMENAFKLDVPLEVEIGIGKNWLEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaaagattatttctactcgatgcgtatgccttaatttttagaggatattat
gcttttataaaaaatccacgaatcaactcaaaaggaatggatacttctgccattataggg
ttcatgaactcattaatggatgtcataaaaagagaaaaaccagatcatttagccgttgca
tttgataaaggaggaagtaactatcgtttagaaatgtttaccgactataaagcaaatcgt
gatgagacacctgaagcgataaaaattgcagtgccttacattcaagaactgcttaaagca
atgcatattcccattattgaaaaagcaggttttgaagctgatgatttaattggcacgctt
gcaaaacaagcagaaaaacaaggatacaaagtttttatggtaacgcccgataaagatttt
ggacaactggtgtccgaaaacattttcatgtatcgcccagcaagaatgggtaacgatatt
gaaatttggggtgttgaagaagtaaaagcaaaatttgagatagaacacccgctgcaagtg
attgattttttaggcatgatgggtgatgctgtggataatataccgggattaccaggtgta
ggtgaaaaaactgcaaaaaaattattagctgaatttggttcgatggaaaatctattagcc
aatacagacaaactaaaaggagcgcttaaagaaaaaattgaagccaataaagaaaaaggt
attttgtcaaaaaaactagctactatattgctcgattgtccagtaacctttgacgaagta
gattatgaattgtctaaacctgatgttgaaaaaacagatgttctttttcaagaattggaa
ttccgtcaaatgaaagcgcaatttgataaattatttggtacggggaaagaatatgacgaa
attgataattcggcactaacatcaacaaatattgaagaggaaaaaataaagaaagttgct
ccaaaaaaaacaaatgaaagtcaaatggatttgttcggattttctgaagacgaatctaat
gaaaatagcgctaattcctactatgcaactttagaaaatacaactcatttttaccaaatt
gtacaaggtgaaatgcctactcaactatttgttcaaaatttgctacaacaacaatctgtt
tgttttgacacagaaacaacaggcttagatgcgctaaatgccacattagtaggtatgtct
ttttcttgggaaaaaggaaaaggttattatgtgccttttcccgaaaatcaagaagaaaca
ttgattttacttcaaaaatttaaacctttttttgaaagtgagtcaattgaaaaaattgga
caaaatatcaaatatgatttaaaggttttacacaactatggtatcgtggtaaaaggtcct
ctttttgacacgatgatagcgcattatttgattaatccagacatgcgacacaatatggat
gttttagcagaaacctatttaaagtattctccaaaatcaatagaaacattaattggtaaa
aaaggtaaagggcaaaaatcaatgcgagatgtgtcactagaagacatcaaagaatatgcc
gctgaagatgcagatgttaccttgcaattaaaggaacattttcaacctattttagaaaaa
gtggggacaaaaaaattatttgacaaaattgaaatcccattagtgcaagtgttagcagat
atggaacaagaaggcgttcaactcgatgtctcttttttacaagcattatctactgagatg
caaattgaaatttcaaatttagaacaaaaaatatacgaaacagcgggtgaaaaatttaat
ttagcttcaccaaaacaacttggagatattttatttgacaaattaaaaattggcggcaca
aaacagaaaaaaacaaaaacaggtcaatatgcaacgggcgaagaagtgttaagttattta
gttaacgaacaccaaattgtaaaagatattttagaatggcgtcaattaattaaactgaaa
agtacttatgtagacgctttgccaaatcaggttaatccaaaaacaaatagagtgcataca
gattatatgcaagctgttgctgctacaggccgcttgagttctaataatcctaatttgcaa
aacattccgattcgttcagaaagaggaagacagattagaaaagcatttgttgcaagagac
gaaaattatgtattgctttctgccgattattcccaaattgaattgcgcattattgcagct
ctttcaggcgaagaaaatatgataaaagcatttcaaaacaatgaagatattcacagaagt
accgccgcaaaagtatttaatgtgccattagaagacgtaacaacagcacaaagaagtcat
gcaaaaacagtgaattttggtattatttatggtgtttctgcttttggtttaagtaatcaa
actaatttatcccgtaaagaaagtgcagatttgattgaggcctattatcaaacctaccca
aagttaaaagcttacatggctaatcaagtaaattttgctagagaaaatggctatgtagaa
actatttctggcagaagacgttatttaaaagacattaattcggctaatgctattgtaaaa
ggtggtgcggagcgaaatgcagtcaacgcacctattcaaggaagtgcggcagatattatt
aaaatagcaatgattcatattcatcaaaaattaagtgctgaaaaatggcaatcaaaaatg
ttattacaagtacatgatgaactcgtttttgatgcgcatattaccgaattagagcaatta
aaaactatgataaaacatgaaatggaaaatgcgtttaaactagatgttccacttgaagtt
gaaataggaataggaaaaaattggttagaagcacattag
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