Flavobacterium nakdongensis: RF683_09455
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Entry
RF683_09455 CDS
T10681
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd00300
Lysine biosynthesis
fnd00470
D-Amino acid metabolism
fnd00550
Peptidoglycan biosynthesis
fnd01100
Metabolic pathways
fnd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RF683_09455
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RF683_09455
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RF683_09455
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RF683_09455
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fnd01011
]
RF683_09455
Enzymes [BR:
fnd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RF683_09455
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RF683_09455
Peptidoglycan biosynthesis and degradation proteins [BR:
fnd01011
]
Precursor biosynthesis
Amino acid ligase
RF683_09455
Racemase
RF683_09455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WMW77706
UniProt:
A0ABY9R8X4
LinkDB
All DBs
Position
2115066..2117507
Genome browser
AA seq
813 aa
AA seq
DB search
MTISTFFIEETLNTSFSNHAENVEFDHISIDSRSLQNSATTLFFCLKGQNHDAHEFIASL
IFKGVSYFIVEYIPAEFEDKAHFCVVQDSAKALQKMATAYKKAFSIETIGVTGSNGKTIV
KEWLNFLLSPDYAIVRSPKSYNSQVGVPLSIFGINEKHNLGIFEAGISEKGEMDALATII
QPNIGVFTHLGTAHDEGFQNTEQKLIEKLKLFKNCKVVILEKNDFVEKHLNCSSFTWSFE
NKNADVVVLSKEKKEQKTHITLKYQNNSFSIWIPFTEESAVENSLTCIASMLYLGIIPEV
IGSRISQLYAVEIRLQAKKGINNCLLIDDSFSSDYQSLKIALDFLDQQKLHQKKTIILSD
IFQSGLDPKQLYTNVIKALQNSKIDRIIAIGETISAQLKDLPNVFCFPSTLVFLQQFNTQ
SFQNETILVKGARNFHFEEIIVLLEEKKHETKLEINLDALTANLNYYKSKLKPETKIMVM
VKAFGYGSGGYEIAKHLEHLKVAYLGVAFADEGIELRKAGITLPIMVLNPENSSFNAIIA
YNLEPEIYSLNGLKSFLELAKQKNLHQYPIHIKIDTGMHRLGFNTAEIEPLIQLIHQNNL
VQVKSIFSHLAASDDVNEKAFTLKQIELFSDAYTIITSAIQYKPTRHILNTSGIFNYAEY
QFEMVRLGIGIYGFGNSEEEYKQLENVSTLKSIISQIRSIDAGESISYNRKFIAPKKMNI
ATIPVGYADGIRRAWGNEKGYVLINQQKATIVGTICMDMLIVDVTNIDCQENDEVIVFGT
QPSIVEMAKVIGTIPYEIITGISQRVPRVFYKN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgactatttctactttttttattgaagaaacattaaacacatcgttttcaaatcatgct
gaaaatgtagaatttgatcatatttcaattgatagtcggtcgctacaaaatagtgcaact
accttatttttttgcttaaaaggtcaaaatcatgatgcgcatgaatttatcgcatctcta
attttcaaaggtgtttcttactttatcgtagaatatattcctgctgaatttgaagataaa
gcccatttttgtgtggtgcaagatagtgccaaagccttacaaaaaatggcaacagcttat
aaaaaagctttttcaatagaaacaattggagttactggtagcaacggaaaaacgatagta
aaagaatggctaaattttctattaagtccagattacgcaatagtccgaagccctaaaagt
tataattcgcaagtgggagtgccgctttctatttttgggattaatgaaaaacataattta
ggcatttttgaagcgggcatttcagaaaaaggcgaaatggatgctttagcaactattatt
cagccaaatataggggtgtttacccatttaggaacagctcatgacgagggttttcaaaac
accgaacaaaaattaattgaaaaattaaaactttttaaaaattgtaaagtcgttattctt
gaaaagaatgattttgttgaaaaacatttaaattgttcgtcctttacgtggagttttgaa
aataaaaatgcagatgttgtagtgctttctaaagaaaaaaaggagcaaaaaacacatatt
acactaaagtatcaaaacaactcttttagtatttggatcccatttaccgaagaatcagca
gtggaaaatagtttaacttgtatagcttcaatgctttatcttgggattataccagaagtt
attggctcacgtatttcacaattatatgcagttgaaattagacttcaggcaaaaaaagga
atcaataattgcttactcattgacgatagcttttcgagtgattaccagtcattaaaaatt
gccttggattttttagaccaacaaaaattacatcaaaaaaagacaattatactatcagat
atttttcagagcggcttagacccaaaacaattatacaccaatgtaattaaggcgttacaa
aacagcaaaattgatagaataattgctataggtgaaaccattagtgctcaattaaaagat
ttgccaaatgtattttgtttcccttcaacactcgtttttttacagcagtttaatacccaa
tcctttcaaaatgaaacgatacttgttaaaggtgcgagaaattttcattttgaagaaatt
attgtgcttcttgaggagaaaaaacacgaaaccaaactagaaattaatttagatgcacta
acggctaatttaaattattataagagcaaacttaaaccagaaactaaaattatggttatg
gtgaaagcgtttggatatggaagcggtggctatgaaattgctaaacatttagaacatcta
aaagttgcttatttaggggttgcatttgccgatgaaggaatcgaattaagaaaagcagga
attacacttcctattatggtgctaaatcctgagaacagtagttttaatgccatcattgct
tataatttggaacctgaaatttattctttaaatggattaaaatcctttcttgaattagca
aaacaaaaaaatctacatcaatacccaatacatattaaaatagatacgggtatgcatcgt
ttaggtttcaatactgcagaaattgagccgttgattcagttgatacatcaaaacaattta
gttcaagtaaaaagtatattttcacatttagccgctagtgatgatgtaaatgaaaaagcg
tttaccttaaaacaaattgaacttttctcagacgcatatactattataacaagtgcaatt
caatacaaaccaactcgccatatactaaacacttctgggatttttaactatgccgaatat
caatttgaaatggttcgattaggtattggtatttatggttttggaaattctgaagaggag
tataaacagttagaaaatgtgagtacgttaaaaagtattatttcacaaattagatccata
gatgctggagaaagcatcagttataaccgaaaatttattgcccctaaaaaaatgaatatc
gccaccattcctgttggctatgccgatggtataagacgtgcttggggcaatgaaaaggga
tatgtactcattaaccaacaaaaagccactatagttggtactatttgtatggacatgctt
attgttgatgtaacaaacattgattgtcaagaaaatgatgaagtaattgtttttggtaca
caaccttctatagtagaaatggcaaaagtcattggtaccattccatacgaaattattaca
ggtatttcacagcgtgtgccacgtgttttttataaaaattaa
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