Fusobacterium animalis 7_1: FSDG_00142
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Entry
FSDG_00142 CDS
T03612
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fne
Fusobacterium animalis 7_1
Pathway
fne02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fne00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FSDG_00142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fne03021
]
FSDG_00142
Transcription machinery [BR:
fne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSDG_00142
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
EEO41583
UniProt:
A0A140PP52
LinkDB
All DBs
Position
complement(1486643..1487896)
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AA seq
417 aa
AA seq
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MVKELIKNEKARALIKKAVEEGIITYEEINEELGDDFPAENIEQLINEMLEQGIKIVDEE
QLDELGEDELKGKNSEEDYTDNEEHDDLLEDETDEKLDTDEENEETETFTEFDDEFNPEY
IEDVSEDELSNEKLLNLGNSAKVDEPIKMYLREIGQVPLLTHDEEIEYAKRAYEGDEEAS
KKLIESNLRLVVSIAKKHTNRGLKLLDLIQEGNIGLMKAVEKFEYTKGYKFSTYATWWIR
QAITRAIADQGRTIRIPVHMIETINKIKKESRIYLQETGKDASPEILAERLGMEVDKIKA
IQEMNQEPISLETPVGSEEDSELGDFVEDQKTTSPYEATNRAILREELDAVLKTLSPREE
KVLRYRYGLDDSSPKTLEEVGKIFNVTRERIRQIEVKALRKLRHPSRKKKLEDFKVD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaaagagctaataaaaaatgaaaaagctagagctttaataaaaaaagcagtagaa
gaagggattataacttatgaagaaattaatgaggaattaggtgatgattttccagctgaa
aatatagaacaacttattaatgaaatgcttgaacaggggattaaaatagttgatgaagaa
caattggatgagttgggggaagatgaactaaaaggaaaaaattcagaagaagattataca
gataacgaagaacatgatgatttattagaggatgaaacagatgaaaaattagatacagat
gaagaaaatgaggaaacagagacttttacagaatttgatgatgaatttaatcctgaatat
atagaagatgttagtgaagatgaattaagtaatgaaaaattattaaatttaggcaatagt
gcaaaagttgatgaacctataaaaatgtatttaagagaaataggtcaagttccattatta
actcatgatgaagaaatagaatatgctaaaagagcctatgaaggtgatgaagaagcaagt
aaaaaacttatagaatcaaatttaagattagttgtgagcattgctaaaaaacatacaaat
agaggtttaaaacttcttgatttaatacaagaaggtaatataggtcttatgaaagctgtt
gagaagtttgaatatacaaaaggatataaattttcaacttatgctacttggtggataaga
caagctataacgagagccatagctgaccaaggaagaacaataagaatacctgttcatatg
atagaaacaataaataaaattaaaaaagaatcaagaatatatcttcaagaaacaggaaaa
gacgcctctcctgaaattttagctgaaagacttggaatggaagttgataaaataaaggca
atacaagaaatgaatcaagaaccaatatctcttgaaactcctgttggaagtgaagaagat
agtgaattaggagattttgttgaagatcaaaaaacaacaagtccttatgaagcaactaat
agagcaattttaagagaagagttagatgctgttttaaaaacattgagtccacgagaagaa
aaggttttaagatatagatatggacttgatgatagttctcctaagacattagaagaagtt
ggaaaaatatttaatgttactagggaaagaattagacaaattgaagtaaaagctcttaga
aaattgagacaccctagtagaaagaaaaaattggaagattttaaggtagattag
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