Fusobacterium animalis 7_1: FSDG_00963
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Entry
FSDG_00963 CDS
T03612
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fne
Fusobacterium animalis 7_1
Pathway
fne03420
Nucleotide excision repair
fne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FSDG_00963
03430 Mismatch repair
FSDG_00963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fne03400
]
FSDG_00963
Enzymes [BR:
fne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSDG_00963
DNA repair and recombination proteins [BR:
fne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FSDG_00963
MMR (mismatch excision repair)
Other MMR factors
FSDG_00963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
CarD_TRCF_RID
DEAD
PcrA_UvrD_tudor
Colicin
TEP1_CUB2
DUF6169
COG4_N
Motif
Other DBs
NCBI-ProteinID:
EEO42404
UniProt:
A0A140PTF4
LinkDB
All DBs
Position
629780..631993
Genome browser
AA seq
737 aa
AA seq
DB search
MNLNLLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENIGISPYSILAVT
FTNKAAKEMRERVEELVGDVAKACTISTFHSFGMRLLRMYGKEVGYNSNFTIYDTDDQKR
IVKAILKGQNLSINGVKLTERDLVSMISKIKEQIKTLDEYSVMNKQIVEVYDKYNRALLE
SNAMDFSDILLNTYKLLQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLC
VVGDENQSIYGFRGANILNILNFENNYNNAKIIKLEENYRSTTTILDAANELIKNNKSSK
DKKLWTQNGKGDLIKVLACDNARDEVSRIIEIIKENHQNGIAYRDMTILYRTNAQSRLFE
EGFLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKVGEKGIE
KIITYARENNLNLLEALSHIKEISGLTVVGKEKLLEMYDIIKELKDLSYTETASYIVQTL
IDKIKYIDYIKENYSDAEARIENIDEFKNSILELENVVGELRLNEYLENVSLISATDDLE
EKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGSRAMFEEKEMEEERRLCYVALTRAEK
KLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIDVKKERLYFADDYSDEIKAYENNRK
FEKKKTEINTKNTIKIPDDTKKVLDTLDFKVGDKVKHKKFGLGVIKNIDAKKIYVQYVDG
TKEMAIILADKLLTKFE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaacttattagaaaagttaaatgataagcaaagagaagcagcctcacaaatt
gatggttcaattttgattttagcaggagctggttctggaaaaacaaggacaattacatac
agaattgcacatatgatagaaaatattggaattagcccttatagtattttagctgttaca
tttacaaataaagcagcaaaagaaatgagagaaagagttgaagagcttgtgggagatgtt
gctaaggcttgtacaatttccactttccattcatttggtatgagacttttaagaatgtat
ggcaaagaagtaggatataattcaaattttactatctatgatacagatgatcaaaaaaga
atagtgaaagctattttaaaagggcaaaatctaagtataaatggggttaaattgactgag
agagatcttgtttctatgatttcaaaaataaaagaacaaataaaaactcttgatgagtac
tctgttatgaataaacaaatagttgaagtatatgataaatacaatagagctttattagaa
agtaatgctatggatttttcagatatacttttgaatacatataaattattacaaaaacca
gaaatacttgaaaaagttcaaaataagtataaatatataatgatagatgaatatcaagat
acaaataatttacaatataagataatagatttaatagcaagaaaatcatctaatctatgt
gtagttggagatgaaaatcaaagtatctatggatttagaggggctaatattttaaatata
cttaactttgaaaataattataataatgctaaaataataaaactagaagaaaattataga
tcaactactacaatattagatgcagcaaatgagttgataaaaaataacaaatcatcaaaa
gataaaaaattatggacacaaaatggaaagggtgatttaataaaggttttagcctgtgat
aatgcaagagatgaagttagcaggataattgaaattatcaaagaaaatcatcaaaatggt
atagcttatagagatatgacaattctatataggactaatgcacaatcaagactttttgaa
gaaggatttttaagatacaatatccctcataaagtttttggaggaattagtttttattca
agagctgaaattaaagatataattgcatatttatctattattgttaacccacaagatgaa
ttaaatttacaaagaataatcaatgttccaaaaagaaaagtgggagaaaaagggatagaa
aaaataatcacttatgccagagagaataatttgaatttactcgaagcactttctcacata
aaagagatttctggattgactgttgttggaaaagaaaagcttttagaaatgtatgatata
ataaaagaattaaaagatttatcttatacagaaacagcttcatatatagtacaaacttta
atagataaaataaaatatatagattatattaaagaaaattatagtgatgcagaagcaaga
atagaaaatatagatgaatttaaaaactctattttagagcttgaaaatgttgtaggtgaa
ttgagattaaatgaatacttagaaaatgtatctttaataagtgcaacagatgatttagaa
gaaaaaagtgattatgtaaaattaatgactattcataattcaaaaggtttggagtttcca
atagttttcttagttggttttgaaaatgaaatctttccagggtcaagggcaatgtttgaa
gaaaaagaaatggaagaagaaagaagactttgttatgttgccttaacaagagcagaaaag
aagttatacttatctcatgcaactataagatttgtatatggacaagatagattgtcaact
ccatcagtatttttaaaggaaataccagaaaaactattagatattgatgttaaaaaggaa
agactatattttgctgatgattattcagatgaaataaaagcctatgaaaataacagaaag
tttgaaaagaaaaaaactgagataaataccaaaaatactattaaaattcctgatgataca
aagaaagttcttgatacattagattttaaagtgggagataaagtaaaacataaaaaattt
ggtttaggtgtaattaaaaatatagatgctaaaaaaatatatgtacaatatgttgatggc
acaaaagaaatggctattatattagcagataaacttttaactaagtttgaatag
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