Fusobacterium animalis 7_1: FSDG_01062
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Entry
FSDG_01062 CDS
T03612
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fne
Fusobacterium animalis 7_1
Pathway
fne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSDG_01062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fne03021
]
FSDG_01062
03019 Messenger RNA biogenesis [BR:
fne03019
]
FSDG_01062
Transcription machinery [BR:
fne03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FSDG_01062
Messenger RNA biogenesis [BR:
fne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FSDG_01062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
Rho_N
AAA_24
AAA_19
OB_RNB
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
EEO42503
UniProt:
A0A140PRV6
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All DBs
Position
514926..516167
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AA seq
413 aa
AA seq
DB search
MDILNKLLLKDLQEIAKVMEIETTAGQKKDDLKRLISHSLEENNTVLAYGTLDTAPEGFG
FLKETTLGKNIYMSASQIKRFKLRRGDQVLGEVRNPIGEEKNFAIKKVLRANDSNLATLE
SRVPFEDLIPTYPTQQFKLGLEQDNISGRILDLISPIGKGQRALIIAPPKAGKTTFISSI
ANALIKGQKDTEVWILLIDERPEEVTDIKENVEGATVFASTFDDDPKNHIKVTEEIIEKA
KMKVEDGEHVVILLDSLTRLSRAYNIVIPSSGKLLSGGIDPMALYHPKNFFGAARNIKNG
GSLTIIATILVDTGSKMDEVIYEEFKSTGNCDIYLDKQLAEFRVFPAIDITKSGTRKEEL
LLNKNQIDDIWNLRRLLNDYDNKVSATSALIKAIKTTRNNDELLAHLPKVLYK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggatattttaaataaacttcttttaaaagatttacaagagatagcaaaagttatggaa
atagaaacaacagcaggtcaaaaaaaagatgatttaaaaaggttaatatcgcattctctt
gaagaaaataacacagttcttgcttatggaacattggatactgctcctgagggatttggt
ttcttaaaagaaactacattaggtaaaaatatctatatgtctgcttcacaaataaagaga
tttaaacttagaagaggagatcaagtattaggtgaagttagaaaccccataggagaagaa
aaaaactttgctataaaaaaggttttaagagctaatgacagtaatttagctacattagag
agtagagttccatttgaagatttaattcctacctatcctacacaacaatttaaacttgga
ttagaacaagataatatttcaggaagaattcttgatttaatatcaccaataggaaaggga
caaagagcactaataattgcaccaccaaaagcaggaaaaacaacttttattagttctatt
gccaatgctttaatcaaaggtcagaaagatacagaagtatggatattattaatagatgaa
agaccagaagaagttacagatataaaggaaaatgttgaaggtgcaacagtttttgcatca
acttttgatgatgatcctaaaaatcatatcaaagtaacagaagaaattattgaaaaagct
aaaatgaaagttgaagatggagaacatgttgtaattttacttgattctttaacaagactt
tcaagagcttataatattgtaataccatcaagtggtaaacttctttcaggtggtatagat
ccaatggcattatatcacccaaaaaacttttttggtgcagcaagaaatataaaaaatgga
ggaagtttaactattattgcaacaattcttgttgatacaggaagtaaaatggatgaagtt
atctatgaagaatttaagtcaacaggaaattgtgatatttatttagataaacagttagct
gaatttagagtttttccagctattgatataactaaatcaggaacaagaaaagaagaattg
cttcttaataaaaatcaaatagatgatatttggaatttaagaagattattaaatgattat
gataataaagttagtgctacctcagcattaataaaagctataaaaacaactagaaacaat
gatgaattattagcacacttaccaaaggttttgtacaaataa
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