Fusobacterium animalis 7_1: FSDG_02140
Help
Entry
FSDG_02140 CDS
T03612
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fne
Fusobacterium animalis 7_1
Pathway
fne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FSDG_02140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fne03021
]
FSDG_02140
03400 DNA repair and recombination proteins [BR:
fne03400
]
FSDG_02140
Enzymes [BR:
fne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FSDG_02140
Transcription machinery [BR:
fne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FSDG_02140
DNA repair and recombination proteins [BR:
fne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FSDG_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
EEO43581
UniProt:
A0A140PUI3
LinkDB
All DBs
Position
complement(2420220..2424179)
Genome browser
AA seq
1319 aa
AA seq
DB search
MGIRNFDKIRIKLASPEKILEWSHGEVTKPETINYRTLNPERDGLFCEVIFGPTKDWECS
CGKYKRMRYKGLVCEKCGVEVTRAKVRRERMGHITLASPVSHIWYSKGSPNKMSLIIGIS
SKELESVLYFARYIVTSSQESTVEVGKILTEKEYKLLKQLYGNKFEAYMGADGILKLLTA
VDLEKLRDELENELAEANSAQKRKKIVKRLKIVRDFIASGNRPEWMILTNVPVIPAELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKKLLEIKAPEIVVKNEKRMLQEAVDALIDNGR
RGKPVVAQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLKMNQCGIPKK
MALELYKPFIMRELVRRELANNIKMAKKLVEESDDKVWAVIEDVIADHPVLLNRAPTLHR
LSIQAFQPVLIEGKAIRLHPLVCSAFNADFDGDQMAVHLTLSPESMMEAKLLMFAPNNII
SPSNGEPIAVPSQDMVMGCFYMTETRKGEKGEGKLFSNIGQVITAYQNNKVGTHALIKVR
MNGELIETTPGRVLFNEILPEIDRNYHKTYGKKEIKSLIKSLYEAHGFTETAELINRVKN
FGYHYSTFAGVSVGVEDLVIPPQKKDLLNKADKEVAQIEKDYKSGKIINEERYRKTIEVW
SRTTQAVTKAMMDNLDRFNPVYMMATSGARGNTNQMRQLAGMRGNMADTQGRTIEVPIKA
NFREGLTVLEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNEEDCHTHEGIE
VEALVGSDGKIIEELSERINGRVLAEDLVYKGKKIAKRNTMIHKDLLNKIEELGIKKVKI
RTPLTCALEKGVCKKCYGMDLSNYGEILLGEAVGVVAAQSIGEPGTQLTMRTFHTGGVAG
AATVVNSKKAENDGEVSFRDIKTIDINGEDVVVSQGGKIIIADNEHEVDSGSVIKVKEGQ
KVKEGDVLVTFDPYYIPIISSHDGKVQYRHFTPKNIRDEKYDVHEYLVVRSVDSVDSEPR
VHILDKKNEKLATYNIPYGAYMMVRDGAKVKKGDIIAKIIKLGEGTKDITGGLPRVQELF
EARNPKGKATLSEIDGRIEILPTKKKQMRVVNVRSLENPEEFKEYLIPMGERLVVTDGLK
IKAGDKITEGAISPYDILSIKGLVAAEQFILESVQQVYRDQGVTVNDKHIEIIVKQMFRK
VKIIDSGDSLFLEDEVIEKRLVDLENKKLEEQGKALIKYEPVIQGITKAAVNTGSFISAA
SFQETTKVLSNAAIEGKVDYLEGLKENVILGKKIPAGTGFNKYKAIKVKYNSEDKSDEE
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgggaataagaaattttgataaaattagaataaaattagcatctcctgaaaaaatattg
gaatggtctcatggtgaagtaacaaaaccagagactataaattatagaacacttaatcct
gaaagagatggattattctgtgaagtaatatttggaccaacaaaggactgggaatgttct
tgtggaaaatacaagagaatgagatataaaggcttagtttgtgaaaaatgtggagttgaa
gtaacaagagctaaggtcagaagagaaagaatggggcatataactttagcttctcctgtt
tctcatatttggtactcaaagggaagtccaaataagatgtctttgattataggtatttca
tcaaaagaattggaatcagttctatattttgcgaggtatatagtaacttctagtcaagaa
tcaactgttgaggttggaaaaatattgacagaaaaagaatataaattattaaaacaatta
tatggcaataagtttgaagcatatatgggggctgatggaattttaaaacttcttacagct
gttgatttagaaaaattaagagatgagttagaaaatgaattagcagaggctaattcagct
caaaaaaggaaaaaaattgtaaagagattaaaaatagttagagattttattgcttctgga
aatagacctgaatggatgatacttacaaatgttcctgtaattccagcagaacttagacct
atggttcaacttgatggaggaagatttgcaacatctgacttaaatgatttatacagaaga
gttattaatagaaataacagacttaaaaaactattagaaataaaagctccagaaattgtt
gtaaaaaatgaaaaaagaatgttacaagaagcggtagatgcacttattgataatggtaga
agaggtaaaccagtagttgctcaaaataatagagaattaaaatctttatctgatatgtta
aagggaaaacaaggaagatttagacaaaacttactaggaaaaagagttgactattcagcg
agatcagttatagttgtaggaccatctttaaagatgaatcaatgtggaatccccaagaaa
atggctcttgaactatataaaccatttataatgagagagttagtaagaagagaattagct
aataatataaaaatggctaaaaaattagttgaagaatctgatgataaagtttgggcagta
atagaagatgttatagcagatcaccctgtacttttaaacagagctcctacattacataga
ctatcaatacaagcattccaacctgtattgatagaagggaaggcaataagattgcatcct
ctagtttgttcagctttcaatgctgactttgacggagaccaaatggcagtacacttaact
ttatctcctgaatcaatgatggaagctaaacttttaatgtttgctcctaataatattatt
tcaccatctaatggagaacctattgctgttccatcacaagacatggtaatgggatgtttc
tatatgactgaaacaagaaaaggagaaaaaggagaaggaaagttattttctaatatagga
caagtgataactgcttatcaaaacaataaagttggaactcatgccttaataaaggttaga
atgaatggagaattaattgaaacaacacctggaagagttttatttaatgaaattttacca
gaaatagatagaaattatcataaaacttatggtaaaaaagaaataaaatccttaatcaaa
tctttatatgaagcacatggttttactgaaacagcagaacttataaatagagttaaaaac
tttggatatcattacagtacatttgctggggtttcagtaggtgttgaagacttagtaatt
ccacctcaaaagaaagatttattaaataaggcagataaagaagttgctcaaatagaaaaa
gattataaatctggaaaaataataaatgaagaaagatatagaaagacaatagaagtttgg
tcaagaacaactcaggcagttactaaggcaatgatggataatttggatagatttaaccca
gtttatatgatggcaacatcaggagccagaggtaatactaaccaaatgaggcagttagct
ggaatgagaggaaatatggcagatacacaaggtagaaccatagaagttcctattaaggca
aattttagagaaggattgacagtgttggaattctttatgtcttcacatggtgcaagaaaa
gggcttgctgatactgcattaagaactgccgattcaggatatttgacaagaagacttgtt
gatatttctcatgaagttatagttaatgaagaagattgtcatactcatgaaggaatagaa
gttgaagcacttgttggttctgatggtaagataattgaagaattaagtgaaagaattaat
ggtagagttttagcagaagaccttgtttataaaggaaagaagatagctaaaagaaatact
atgattcataaagatttattaaataaaattgaagaattaggaattaaaaaagtaaaaatt
agaactcctttaacttgtgcattagaaaaaggtgtttgtaaaaaatgttatggtatggat
ttatccaactatggagaaattttactaggagaagctgttggagtggttgctgctcaatca
ataggagaacctggtactcagcttacaatgagaactttccatacaggaggagttgcagga
gcagctactgttgtaaattctaaaaaggcagaaaatgatggagaagtttcattcagagat
attaaaactattgatatcaatggagaagatgtagttgttagccaaggtggaaaaattatt
atagcagacaatgaacatgaagtggattcaggttctgtaataaaagtaaaagaaggacaa
aaggtaaaagaaggagatgtacttgttacatttgacccttattatatacctataatttct
tctcatgatggaaaagttcaatatagacattttactcctaaaaatatcagagatgaaaag
tatgatgttcatgaatatttagttgtaagatctgttgatagtgttgactcagaaccaaga
gtacacatacttgataagaaaaatgaaaagttagctacttacaatattccttatggtgca
tatatgatggtaagagatggagccaaagttaaaaaaggtgatatcatagctaagattatt
aagttaggagaaggaactaaggatatcacaggaggtcttccaagagtacaagaactattt
gaagcaagaaatccaaaaggaaaggcaacactttctgaaatagatggaagaatagaaata
ttaccaaccaagaaaaaacaaatgcgtgttgttaatgttagatcattggaaaatccagaa
gaatttaaagaatatttaattcctatgggggaacgtttggttgttactgatggtttgaag
ataaaagcaggagataagataacagaaggagctatttctccttatgatatattaagtatt
aaaggacttgtagcagctgaacaattcatacttgaatctgtacaacaagtttatagagat
caaggtgttacagttaatgataaacatatagaaattattgttaaacaaatgtttagaaag
gttaaaataattgattctggagattctttattccttgaagatgaagttatagaaaagaga
cttgtagatcttgaaaataagaaattggaagaacaaggaaaagcacttattaaatatgaa
ccagttatacaaggtatcacaaaagctgctgtaaatactggaagttttatatctgctgca
tctttccaagaaacaacaaaagttttatcaaatgctgctattgaaggtaaggttgactac
ttagaaggattgaaagaaaatgtaattttaggtaaaaaaattccagcaggaacaggattt
aataagtataaggctataaaagttaaatataacagtgaagacaaatctgatgaagaataa
DBGET
integrated database retrieval system
