Fusobacterium animalis 7_1: FSDG_02371
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Entry
FSDG_02371 CDS
T03612
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fne
Fusobacterium animalis 7_1
Pathway
fne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSDG_02371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fne03019
]
FSDG_02371
03009 Ribosome biogenesis [BR:
fne03009
]
FSDG_02371
Enzymes [BR:
fne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FSDG_02371
Messenger RNA biogenesis [BR:
fne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FSDG_02371
Ribosome biogenesis [BR:
fne03009
]
Prokaryotic type
rRNA helicases
FSDG_02371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DeaD_dimer
AAA_22
NDK
2H-SAK
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
EEO43812
UniProt:
A0A140PTI4
LinkDB
All DBs
Position
complement(151075..152661)
Genome browser
AA seq
528 aa
AA seq
DB search
MEQLEKLKEFRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKT
AAFSLPIIENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVIPVYGGQSIDIQR
KLIKTGVDVVVGTPGRVIDLIERKLLKLNSLKYFILDEADEMLNMGFIEDIEKILTFTNE
DKRMLFFSATMPDEIMKVAKNHMKEYEVLAVKSRELTTDLTEQIYFEVNERDKFEALCRI
IDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYREVTLKRFKTKKINIL
VATDVAARGIDINDLSHVINYAIPQEVESYVHRIGRTGRAGKEGTAITFITPQEYRRLLQ
IQKAVKKEIKKEKLPDVKDVIQAKKFRIIDDIGQILIDNDYDKFKKLAKDLLKMEDAENI
VASLLKLSYSDVLDESNYNEISPVKMEDTGKARLFIAMGRKDGMTPKKLVEFIVKKARVK
QSYIKNAEVYEGFSFVSVPFKEAEIIVEVFAKNRKGKKPLIEKAKTKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattagaaaaattaaaagaatttagagatttagggcttagtgaaaaggtatta
aaagtattatcaaaaaaaggatatgaatctcctacacctatacaaagattaacaatacct
gctcttttaaaaaatgataaagacataataggacaagcacaaactggaacaggtaagact
gctgctttttctttaccaataatagagaactttgaaaacttagaacatatacaagctatt
gttttaacaccaacaagagaattggctttacaagtagctgaggaaatgaatagtttaagt
acaagtaaaaagatgaaagtgattcctgtctatggtggacaatcaatagacatacaaaga
aaacttatcaaaactggtgtagatgtggttgtaggtacgcctggtagagttatagattta
attgaaagaaaattattaaaattaaattcattaaaatattttatcttagatgaagcagat
gaaatgcttaatatgggttttattgaagatatagaaaaaatattaacttttacaaatgaa
gataaaagaatgttatttttctctgcaactatgcctgatgaaattatgaaggttgctaaa
aatcatatgaaagagtatgaagttttagcagttaagagtagagaacttacaacagattta
acagaacaaatttattttgaagtaaatgaaagagataaatttgaagccctatgtagaatt
atagatttaacaaaagagttttatgggattattttttgtagaacaaagactgatgtaaat
gaaattgttggaagattaaatgacagaggttatgatgctgaaggtctacatggagatata
ggtcaaaattatagagaagttactttaaaaaggtttaaaactaagaaaataaatattctt
gttgcaacagatgtggctgcaagaggtatagatatcaacgatttaagtcatgttataaac
tatgctattccacaagaagttgaaagttatgtacatagaataggtagaacagggcgtgct
ggtaaagagggaactgctataacttttataactccacaagagtatagaagacttttacaa
attcaaaaagcagttaaaaaggaaattaaaaaagaaaaattacctgatgttaaagatgtt
attcaagctaaaaagtttagaataatagatgacatagggcaaattttaatagataatgat
tatgataaatttaaaaaattggctaaagacttacttaaaatggaagatgcagaaaatatc
gttgcctctcttttaaaattatcatacagtgatgttttagatgaaagcaactataatgaa
atttctcctgtcaaaatggaagatacaggtaaagcaagattattcattgctatgggtaga
aaagatggcatgacacctaagaaattggttgaatttattgttaaaaaagcaagagtaaaa
caaagctatattaaaaacgcagaagtttatgaaggtttctcatttgtttctgttcctttt
aaagaggcagaaataatagttgaggtttttgctaaaaatagaaaaggaaagaaaccatta
atagaaaaagcaaagactaagaaatag
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