Fusobacterium necrophorum subsp. funduliforme: BSQ88_01590
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Entry
BSQ88_01590 CDS
T06168
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
APC_u5
Motif
Other DBs
NCBI-ProteinID:
AYV92446
UniProt:
A0A161QUB2
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Position
304650..305789
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AA seq
379 aa
AA seq
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MKQRGSIVILSVIILFLFIRLQEESQKEIVNLEGFTEYYETSVADNGGFELIESFYNFER
VYHFPNHYIEAPKKEEEEKKEQNKYPTKSTYIVKKGDTPSKIAAKFGMSLNSFRANNPNM
DKNLKVGSSVNIVSEDGVFYKLQKGDSLSRIAVKYKVKAADIVKYNNISPKKMKVGQEIF
LKSPDYKAFLEKEKPKLTKKEIDKKLKEKQEKEDQKIYAKNKKTGQSIKKKQEEPEKEEG
KKEDSDTGGTASSGGFSMPVRYAGVSSPYGSRFHPVLKRYIFHSGVDLVAKYVPLRAARA
GVVSFAGNMSGYGKIIIIKHDNGFETRYAHLSQISTRVGEHVERGELIGKTGNTGRTTGP
HLHFEIRRSGKTLNPMKYL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacggggaagcatagtcattctgagtgtgattattttatttcttttcattcgc
ttacaggaagaatctcaaaaggaaattgtgaatttggaaggatttacagaatattatgag
acgtcggtagcggacaacggaggatttgagcttattgaaagtttttataactttgaaagg
gtgtaccattttccgaatcattatatagaagccccgaaaaaagaggaagaagaaaagaaa
gagcaaaacaagtatcccacaaaatctacctatattgtaaaaaaaggagataccccatct
aaaattgcagcgaaattcgggatgagtttgaacagttttcgagccaacaatcctaatatg
gataaaaatttaaaagtgggaagtagtgtgaatattgtttcggaagacggagtattctac
aagttacaaaaaggggattcactgagtcggattgctgtcaaatataaagtaaaggcagca
gatattgtcaagtataataatatcagcccgaaaaaaatgaaagttggacaggaaattttc
ttaaaaagtcctgattataaagcttttttagaaaaggaaaaaccgaagttaacgaaaaaa
gaaattgataaaaaattaaaggaaaaacaggaaaaagaagatcaaaaaatttatgcaaag
aataagaaaacaggacaaagcattaaaaagaagcaagaggaaccggagaaagaggaagga
aaaaaagaggattctgatactggaggaacagcttcttctggaggattctctatgccggtt
cggtatgcgggagtttcgagtccttacggttcccgatttcatcctgttttaaaacgatat
atttttcattccggagtcgatttggtagcgaagtatgtaccattgagagcggcaagagcc
ggagtggtgagttttgccggaaatatgagcggatatggaaaaattatcattatcaagcat
gataatggctttgaaacaagatatgctcatttaagtcaaatttctactcgagtgggagag
catgtggaacgtggagaattgattggaaaaacgggaaataccggaagaacaacgggacca
cacttacattttgaaatacgacgctccggaaaaacactcaatccgatgaaatacttataa
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