Fusobacterium necrophorum subsp. funduliforme: BSQ88_02625
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Entry
BSQ88_02625 CDS
T06168
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Pathway
fnf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BSQ88_02625 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnf03400
]
BSQ88_02625 (xseB)
Enzymes [BR:
fnf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BSQ88_02625 (xseB)
DNA repair and recombination proteins [BR:
fnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BSQ88_02625 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AYV92634
LinkDB
All DBs
Position
522553..522789
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AA seq
78 aa
AA seq
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MEFLVKTMKKNSFEANLAEIDMIIAKMESGELSLEDSIKEYEKAMKLLKKSSDLLEAAEG
KLYQVMKNQEGELQIEEL
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atggaatttttggtgaaaacaatgaagaagaatagttttgaagcaaatttggcagagatt
gatatgattattgcaaaaatggaatccggagaattgagcttagaagattctatcaaagaa
tacgaaaaggcaatgaagttattaaaaaaatcttcggatttattggaagctgcggagggg
aaattatatcaagtcatgaaaaatcaagaaggagagcttcagattgaggaattatag
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