Fusobacterium necrophorum subsp. funduliforme: BSQ88_03215
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Entry
BSQ88_03215 CDS
T06168
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Pathway
fnf03030
DNA replication
fnf03430
Mismatch repair
fnf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSQ88_03215 (dnaX)
03430 Mismatch repair
BSQ88_03215 (dnaX)
03440 Homologous recombination
BSQ88_03215 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnf03032
]
BSQ88_03215 (dnaX)
03400 DNA repair and recombination proteins [BR:
fnf03400
]
BSQ88_03215 (dnaX)
Enzymes [BR:
fnf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSQ88_03215 (dnaX)
DNA replication proteins [BR:
fnf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSQ88_03215 (dnaX)
DNA repair and recombination proteins [BR:
fnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSQ88_03215 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
Rad17
RuvB_N
AAA_5
AAA_30
DnaX_C
AAA_7
AAA_2
AAA_19
TIP49
ResIII
AAA_assoc_2
AAA_16
AAA_18
RCF1-5-like_lid
TsaE
Mg_chelatase
NTPase_1
ABC_tran
nSTAND3
Sigma54_activat
DNA_pol3_gamma3
NPHP3_N
PTPlike_phytase
AAA_28
RsgA_GTPase
QueC
DUF7115
Motif
Other DBs
NCBI-ProteinID:
AYV92742
UniProt:
A0A162IX89
LinkDB
All DBs
Position
648856..650262
Genome browser
AA seq
468 aa
AA seq
DB search
MYITLYRKYRPSSFQEVAGEQEIVRALKNALKNNQLSQAYLFTGPRGVGKTTIARLIAKS
VNCLEPKEDGEACGVCENCTSFQEGSFLDLVEIDAASNRGIDEIRLLKEKINYQPSQGKK
KVYIIDEVHMLTKEAFNALLKTLEEPPAHVIFILATTEPDKILPTIISRCQRYDFKTLSL
QDMGNQLQYILSRENLEMEEEVKELIYEASGGSMRDAISVLERLIVSSSEKKISLEESEK
ILGMTPIQKMEQFLHCLLQEEKKTILRELDELWFQSVDMEAFLKDFAKFIKNQIKKEKLE
VEKGLFIIKNIYEVLNIFRLEEDKRLVAYVLVEKLQKRESTAVPVEKKKVFLETAKTETS
ISLAEIQNRWEEIIDKAREEKISMGVYLSTATLHSLEDNVLTLCYEESNLFSKEQMEEKQ
YSSILLKVLEEEWKQKFKLRVLTVANEGKRENHVTKKILNYFGGEIIS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaccttatatcgaaaatatagaccttcgagttttcaggaggttgcaggggaa
caagagattgttcgagccttaaaaaatgctttaaaaaacaatcaactttcacaagcttat
ttgtttacaggtcccagaggggttggaaaaacaacaatagcaagattgattgcaaaatcc
gtgaattgtttggagccgaaagaagacggagaagcttgcggtgtttgtgaaaattgtact
tcctttcaagagggaagtttcttggatttggtagaaattgatgccgcctccaatcgtgga
attgatgaaattcgcctattgaaagagaaaattaattatcaaccaagtcagggaaagaaa
aaagtttacatcatcgatgaagttcatatgctgactaaggaagctttcaatgctctctta
aaaaccttggaagaaccaccggctcatgtgatatttattttagctactacagaaccggat
aaaattttaccgaccattatttcgagatgtcaaaggtatgattttaaaactttatcttta
caagatatgggaaatcagttacaatacattctaagtcgagagaacttggaaatggaagaa
gaggtaaaagagttaatctatgaagcttccggcggaagtatgagagatgcgatttccgtt
ttggaaagattgattgtaagctcttccgaaaagaaaatttcgttggaagagagtgaaaaa
atattaggaatgacgcccattcagaagatggaacaatttctacactgtctattacaggag
gaaaagaagacaattctacgagaattggatgagctttggtttcaatccgtggacatggaa
gcttttttaaaggattttgcaaaatttattaagaatcaaatcaaaaaagagaagttggaa
gtagaaaaaggattgtttatcataaaaaatatttatgaagttctgaatatttttcgttta
gaagaggataaacgtctggttgcctatgttttagtggaaaaattacagaaacgcgagtcg
acagcagttcctgtggaaaaaaagaaagttttcttggaaactgcgaaaacggaaacctca
atttctctagcagaaattcaaaatcgttgggaagagattatagacaaggcaagggaagaa
aaaatttctatgggagtatatctgtcgacagcaactttacattctttagaggacaatgtt
ctgaccttatgttatgaagaaagtaatttattttccaaagaacaaatggaagagaaacaa
tattcttctattttgttgaaggtattggaagaggagtggaagcaaaagtttaaactacgg
gtactcacagttgcgaatgagggcaaacgggaaaatcatgttacaaagaaaattttaaac
tattttggaggggagattatttcatga
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