Fusobacterium necrophorum subsp. funduliforme: BSQ88_04435
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Entry
BSQ88_04435 CDS
T06168
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Pathway
fnf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSQ88_04435 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnf03019
]
BSQ88_04435 (pnp)
03016 Transfer RNA biogenesis [BR:
fnf03016
]
BSQ88_04435 (pnp)
Enzymes [BR:
fnf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BSQ88_04435 (pnp)
Messenger RNA biogenesis [BR:
fnf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSQ88_04435 (pnp)
Transfer RNA biogenesis [BR:
fnf03016
]
Prokaryotic type
tRNA degradation factors
BSQ88_04435 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
SAC3
Motif
Other DBs
NCBI-ProteinID:
AYV94059
UniProt:
A0A162JHB1
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All DBs
Position
902737..904860
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AA seq
707 aa
AA seq
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MFDEKTLEMELAGRSLKVSTGKIARQSCGAIMIQYGDTVLLSTVNRSKEARKGVDFFPLT
VDYIEKFYAAGKFPGGFNKRESRPSTDATLIARLIDRPIRPMFPEGFTYDVHIVNTVFSF
DEKNTPDYLGIIASSLALSISDIPFLGPVAGVVVGYIDGEFVLNPTPEQLEKSLLDLSVA
GTKEAVNMVEAGAKELDEETMLKAILFAHENIKKVCAFQEEFVKICGKEKITFEKEEVDP
MISSFIEEHGHERLQQAVLTLGKKNREEAVDSLEEELLEAFVAKHYPEIPEEELPEEPIL
AFKKYYHDLMKTLVREAILYKKHRVDGRSTTEIRPLDAQINVLPIPHGSALFTRGETQSL
ATATLGTKEDEQLVDNLEKEYYKKFYLHYNFPPYSVGETGRMGAPGRRELGHGSLAERAL
RYVIPTEEEFPYTIRVVSDITESNGSSSQASICGGSLALMSAGVPIKEHVAGIAMGLIKE
GEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALSQAHVARQ
QILEVMNAAISSPADLKPNVPRIQQIMIPKDKIAILIGPAGKNIKGIIEETGSTIDITDD
GKVSIFSKDADILEHTLRLVNNYVKDVELNEVYEGKVVGIQKFGAFMEILPGKEGLLHIS
EISKERVSNVEDVLKIGDVFKVKVISMENGKIALSKKKLDVEYKVAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgaaaaaacattggaaatggaactggcaggaagaagcctgaaagtttctact
ggaaagattgcaagacaatcttgtggagccattatgattcaatacggagatacggtgtta
ctttctaccgtaaacagaagcaaggaagcaagaaagggtgtcgacttctttcctttgaca
gtggattatattgaaaaattttatgcagcaggaaaatttcccggaggatttaacaaaaga
gaaagtagaccttcaaccgatgccactttgatagctcgtttgatagatagacccattcga
ccgatgtttccggaaggatttacttacgatgtacatatcgtcaatactgtattctccttt
gatgaaaaaaatacaccggattatttaggaattattgcttcgtccttagctttaagtatt
tcggacattccttttttaggaccggtagccggagtggttgtgggatatatcgacggagaa
tttgtattaaatcctactcccgaacaattggaaaaaagtttattggatttatccgtggcg
ggaacaaaagaagcggtcaatatggtggaagcgggagccaaagaattggatgaagaaacg
atgttaaaagctattttgttcgctcatgaaaatattaagaaagtttgtgctttccaagaa
gaatttgtaaaaatttgtggaaaggaaaaaattacttttgaaaaagaagaagtcgatccg
atgatctcttctttcatagaagaacatggtcatgaaagattacaacaagcggttctaaca
ctaggaaagaaaaatcgagaagaagctgtagatagcttggaagaagaattattagaggca
ttcgttgcaaaacattatcccgagatcccggaggaagagcttccggaagaacctattttg
gcgtttaagaaatactatcatgacttgatgaaaacattggttcgggaagctattttgtat
aaaaagcacagagtcgacggaagaagcacaacggaaattcgacccttggacgctcaaatc
aacgtattgccaattcctcacggttccgctttgtttaccagaggagaaacgcagtctctt
gccactgcaactttaggaaccaaagaggatgaacaattggtggataatttggaaaaagaa
tattataaaaaattctacttacattataacttccctccatattctgtcggagaaacggga
agaatgggagcacccggaagaagagaattgggacacggatctttggcggaaagagctttg
cgttatgtcattccgacagaggaagaatttccatataccattcgagtcgtttccgatatt
acggaatccaacggttcctcttctcaagcgtcgatttgtggaggttctttggcattgatg
tcggcaggagttcctattaaggaacatgtggcgggaattgctatgggacttatcaaagag
ggagaagagtttactgttttaacggatattatggggttggaggaccatttgggagatatg
gacttcaaggtagcaggaacaaaatcaggaattacagccttacaaatggatattaaaatt
acaggaattacggaagaaattatgagaattgctttgagtcaagctcatgtggcaagacaa
caaattttggaagtgatgaatgctgctatttccagcccggcagatttaaaaccgaatgtg
cctagaattcaacaaattatgattccaaaggataaaattgccatcttgattggaccggcc
ggaaagaatattaaaggaattattgaagaaaccggttctaccatagatatcactgatgac
ggaaaagtttccattttctcaaaagatgctgatatattggaacatactttgcgactggta
aataattatgtgaaagatgtggaattgaatgaagtgtatgaaggaaaagtggtaggaatt
caaaagtttggggcttttatggaaatcctgccgggaaaagaaggattgttacacatttct
gaaatttcaaaggaaagagtatccaatgtagaagatgttttgaaaataggagatgttttt
aaagtaaaagtaatttccatggaaaatggaaaaattgcattgagtaagaaaaagctggat
gtggaatacaaagtagcagagtag
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