Fusobacterium necrophorum subsp. funduliforme: BSQ88_04660
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Entry
BSQ88_04660 CDS
T06168
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnf03400
]
BSQ88_04660
DNA repair and recombination proteins [BR:
fnf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ88_04660
Archaeal homologous recombinant proteins
BSQ88_04660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AYV92999
UniProt:
A0A162JAT0
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All DBs
Position
complement(953228..954394)
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AA seq
388 aa
AA seq
DB search
MKILHCSDLHLGKKPGGNKRFAETRYQDYFRVFEELIEKIAPLEIDVFIISGDLFDKKEI
NANILERTEELFQKLKAYKPEMSILVIEGNHDVIHRQEDSWLEYLKNKGYCDVFSYRKNY
ENKNAFQIGDIHFYPVGYPGFMVEKTLQDLAEHLDPSQKNIIIVHTAIFGIENLPGLVTA
ETIDLFRNKVLYMAGGHVHSFSAYPKENPYFFVPGSLEYTNIPREKSYQKGAIYFDTDTR
EFERILISPRKRLRTEVFSWEKELESEFESFIRHYAKQEEELFIIPVNIKSGEYFPIEKL
ESIAERHGILKVYFEMRENGRAQEKDGEEGYSSLEELEQKIIRSWKLLKNPERFIRSFSQ
LKEFSLEGKQEELFHLFDEILEEDEDAD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgcactgctccgacctgcatttgggaaagaaaccgggtgggaacaaacga
tttgcagaaaccagataccaagattattttcgagtttttgaagagctgattgaaaaaatt
gctcctctggaaatcgatgtatttattatttccggagatctctttgataaaaaggaaatc
aatgcgaatattttagaaagaacggaagaactttttcaaaaattaaaggcttataagccg
gaaatgtcgattctcgtgattgaaggaaatcatgatgtcattcatcgccaagaggattct
tggttggaatatctgaaaaacaaaggatattgtgatgttttttcctatcgaaagaactat
gagaacaaaaatgctttccaaataggagatatccacttttatcccgtaggatatccggga
tttatggtggaaaaaaccttacaagacttggcagagcatttggatccttcgcaaaaaaat
atcatcatcgtccatacagctatttttggaattgagaatttaccgggactggtaacggcg
gaaaccattgatttatttcgaaataaggtattgtatatggcaggagggcatgtccactct
ttttccgcctatccgaaagaaaatccctacttttttgttcccggctctctggaatacacc
aatattcccagagaaaaatcctatcagaaaggagctatttacttcgacacggacacaaga
gaatttgaaagaattctgatttctccaagaaaaaggctgcgaacggaagttttttcttgg
gaaaaggaattggaatcggaatttgaaagttttatccggcattacgccaaacaggaagaa
gaacttttcatcattcctgtcaacatcaaatctggtgaatactttcccatcgaaaaattg
gaaagcattgcagaacggcatggaattttaaaagtctattttgaaatgcgggaaaacgga
agagctcaagaaaaagacggagaagagggctattcttcgttggaagaattggagcagaag
attatccgttcctggaagcttttgaaaaatccggaacgttttatccgcagtttttctcag
ctgaaagaattcagcttggagggaaaacaggaagaattatttcatttgtttgatgaaatc
ttagaggaggacgaagatgcggattaa
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