Fusobacterium necrophorum subsp. funduliforme: BSQ88_04980
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Entry
BSQ88_04980 CDS
T06168
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fnf03016
]
BSQ88_04980 (truB)
Enzymes [BR:
fnf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BSQ88_04980 (truB)
Transfer RNA biogenesis [BR:
fnf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BSQ88_04980 (truB)
Prokaryotic type
BSQ88_04980 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
LytM_N
Staufen_C
Methyltranf_PUA
Motif
Other DBs
NCBI-ProteinID:
AYV93058
UniProt:
A0A162JC42
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All DBs
Position
complement(1030546..1031403)
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AA seq
285 aa
AA seq
DB search
MDGIIVVKKEKGMSSFDVIRSLRKILQERKIGHTGTLDPLATGVLILCVGKATRLAQEIE
AEEKIYEAEMEFGYQTDTYDLEGKVVTESLKKKVSREEFEKVLEKWKGDILQVPPMYSAI
KLQGKKLYELARKGVEVEREARKVTVFEIHTLEFQQTKAKILTKVSKGTYIRSLIHDIGK
DLGSFATMTALNRIQVGEHTLKNAYTISEIHDKIKICDFSFCIPVEEYFLFPKIQLEGEK
NRSLFQNGNTVIFQEKDGKYRVYQEEVFLGLGKIEHQRLKGYKYF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtggatggaattattgttgtgaaaaaagaaaaaggaatgtcctccttcgatgttattcgt
tctttgcgaaaaatattacaagagcgaaaaataggacatacaggaactttagatccttta
gcgacaggagttttaattttatgtgtgggaaaagcaactcgtttggcacaggaaattgaa
gcggaagaaaaaatatatgaagcggaaatggaattcggctatcaaacggatacctatgat
ttggaaggaaaagtcgttacagaatccctcaaaaagaaagtttcccgggaagaatttgaa
aaggttttggaaaaatggaaaggagatattttacaggtccctcccatgtattccgcaatt
aaattacagggaaaaaaattatatgaattggcaagaaaaggcgtagaagtggaaagagaa
gcaagaaaagtcactgtttttgaaatacatactttagagtttcaacaaacaaaggcaaaa
attttaaccaaagtttccaaaggaacttacattcgttctttaattcatgacattggaaaa
gatttgggaagttttgccaccatgacagccttaaatcggattcaagtaggagaacatact
ttgaaaaatgcctatacaatttcggaaattcatgataaaataaaaatctgtgattttagt
ttttgcattcccgtggaagagtattttttgttccctaaaatacaactcgagggagaaaaa
aatcgaagtcttttccaaaatgggaatactgtaatttttcaggaaaaagatggcaaatat
cgagtatatcaggaagaagtttttttaggattgggaaaaattgaacatcaaaggctaaaa
ggatataagtatttttaa
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