Fusobacterium necrophorum subsp. funduliforme: BSQ88_06300
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Entry
BSQ88_06300 CDS
T06168
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fnf02000
]
BSQ88_06300
Transporters [BR:
fnf02000
]
Other transporters
Pores ion channels [TC:
1
]
BSQ88_06300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
LbR_Ice_bind
KCNQC3-Ank-G_bd
crAss001_48
Motif
Other DBs
NCBI-ProteinID:
AYV93292
UniProt:
A0A162JH22
LinkDB
All DBs
Position
1323733..1326930
Genome browser
AA seq
1065 aa
AA seq
DB search
MKNKKYLLFCLCLLAFSQSAFGAVNDDRVSPTGTDGNHIYVTEHDHLDENPATLQKLGGQ
NSLTIENVGNEVKGRWNVAIGMKNVTDDVFSAAFGYRNSATKWSSSAFGQWNEAIGEFSS
AFGYWNFATGRFASAFGSRNEAKGTKSTAIGFENEAHSHATSVGYRNLVWGGNNAFGNSN
IVKGSTSTAIGSGNKIEGPDNTYDLNQGEYNFILGSSNEIAAHANNNFILGNRVTIGKGI
HRAVVLGSDSTAVNNAVSVGSATERRRIVNVADGTQDTDAATVGQVKNLIASGTGTTSES
ETDPVFKKGESDYSIVAGINNKATDWQSSAFGHDNEATNDHSSAFGFKNIAGGDYSSAFG
NTNTATEHASSAFGYGNKAQGENSSAFGFENIASGINSSAFGYKNTASGKRSAAFGLSNR
AEGNDSFAFGRGNIAKNQDSFAFGFVNKAYGKHSSAFGYDNETYGENTSAFGFHSRVDGN
NSSAFGYEISVSGEGSGAFGRGEYNYSGGHRYKIEGNNSWAIGSYNSIAAGADNNYILGN
NIAIGAGITGSIVLGDKSTVEHSDTLSIGSATNKRRIVHVAEGTADTDAATVGQVKNLLA
SSSGSGGTVDAYTKAETDSKFATKTDMENIKTNKLDTSTYNHDKAIVEGSLQNKVDKDAS
NLSESDVNAWKAKLGVGTGSGTPIDAYTKAESDNKFATVDSLNNKLDKEVYNKEKATFAT
KTDLNTKADKNNVYTKTETDDKYLDKTTYNADKANFATKTELDSKVNKDGSNLSVDDITS
WKEKLAVATVNSIANTAAGNQSTGLGHGNVISGNYSTAVGYKNKVSGNNSGAFGDPNIVT
GNRSYAFGNDNTIAGDDNFVLGSNVKIGEGITNSVALGNNSTVSGSNEVSVGSSANKRKI
TNVADGEISETSSDAVTGKQLYSAMKNTSGVENLRNEVNEKFADVKSKINHVGSLSAALS
ALHPMQYDPKAPNQIMAAVGHYKDKQAVAVGLNHYFSPNFMVNAGVALGNESKVNTMANL
GFTWKIGKGSEEMPQENFSTELQRLTAENRELNERIRRLEEAIKK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataagaagtatttgttgttttgtttatgtttattagcgttttctcaatcagct
tttggagcagtaaatgatgacagagtcagtccaaccggaactgacggaaatcatatctat
gtgacagaacatgatcacctagatgaaaatcctgcaacactccaaaaattaggagggcaa
aacagccttacaatcgaaaatgtcggtaatgaggtaaaaggtcgatggaatgtggcaatt
ggaatgaaaaatgtcacggacgacgttttcagtgccgcttttggatatcgtaactccgct
actaaatggagcagttccgcttttggtcaatggaatgaagcaatcggagaattcagttcc
gcctttgggtattggaatttcgcaaccggaagatttgcttccgccttcggatcccgcaat
gaagctaaaggaacaaaaagcaccgccatcggatttgaaaatgaggcacactcacatgct
acttccgtcggatatagaaacttggtatggggaggtaataacgccttcggaaattcaaat
attgtaaaaggaagtacaagtactgctatcggtagcggaaataaaatagaaggtcccgac
aatacttacgacctaaatcaaggagaatataattttattcttggaagtagcaatgaaata
gcagcacatgccaataataattttatactgggaaatcgtgttaccattggtaaaggaatc
catagagccgtagtattgggaagtgactcaacagcagtaaataatgccgtatctgtcgga
tcggcaacagaaagaagaagaatagtcaatgttgcagacggaactcaagataccgatgct
gcaactgtgggacaagttaagaatttaatcgcttcaggtacaggaacaacttcggaaagt
gaaacggatccggttttcaaaaaaggagaaagtgactacagcatagttgccggaataaat
aataaagcaaccgattggcaaagttctgcttttggacacgataatgaagcaactaacgat
cacagttccgctttcggttttaaaaatatagcaggaggagattacagctcagcttttgga
aataccaatacggcaacagaacatgccagctctgcttttggatatggaaataaagctcaa
ggagagaatagttccgctttcggttttgaaaatatagcatcaggaatcaatagttccgcc
ttcggttataagaacacggccagtggaaaacgtagtgccgctttcggccttagcaataga
gcggaaggaaatgacagttttgcttttggacgtggtaacattgcaaaaaatcaagacagt
tttgctttcggttttgttaataaagcatatggaaagcatagttccgctttcggttatgat
aatgaaacctatggagaaaatacttctgcctttggttttcatagcagagtagacggaaat
aacagctctgcctttggatatgagatatccgtatcaggagaaggatcaggtgctttcggt
agaggagaatataattatagtggaggtcacagatataaaatagaaggaaacaattcttgg
gcgataggttcttataatagtattgcagcgggagcagataataattatatattaggaaat
aatatagctattggtgcaggaattaccggctctatagttttaggagataaatctaccgtt
gaacacagtgatactctttctataggttcagcaacaaataaaagaagaatagttcacgta
gcagagggaactgccgacactgatgctgcaaccgttggacaagttaaaaatcttcttgct
tcaagttcaggaagcggtggaacagtagatgcttataccaaagctgaaactgatagtaaa
tttgctacaaaaacagatatggaaaatataaagacaaataaattagatacttctacttac
aatcatgataaagcaattgtagaaggctctcttcaaaataaagtagataaagatgcaagc
aacttatcagaaagcgatgtcaatgcttggaaagccaagttaggagttggaaccggtagt
ggaactcctatagatgcctatacaaaggcagaaagtgataataaattcgcaactgttgac
agtttaaacaataaacttgacaaagaagtttataataaggaaaaagcaacctttgcaaca
aaaacagacttaaatactaaagcggataaaaataatgtatatacaaaaactgaaactgac
gacaaatacttggataaaactacttataatgcggataaagcaaactttgcaacgaaaacg
gaattggatagtaaagtgaacaaggatggaagcaatctatctgtagacgatattacttct
tggaaagaaaaacttgccgttgccactgttaatagtattgccaataccgccgcaggaaac
caaagtacaggtctgggacatggaaatgttattagtggaaattattccacggctgttggg
tataaaaataaagtaagtggaaataattcaggagccttcggggatccaaatatcgttacc
ggtaatcgttcctatgcctttggtaatgataatacgatagcaggcgatgataattttgtt
ctgggttctaatgtaaagataggagagggaattacaaattcggttgcacttggaaataac
tcaacagtaagcggttctaacgaagtttcagtaggatcctctgcaaacaaaagaaagata
acaaatgtagcggatggagaaatatcggaaacttcatctgatgcggtaacaggaaaacaa
ctttacagtgctatgaaaaatacaagtggtgtagaaaatctaagaaatgaagtaaatgaa
aaatttgcagatgtcaaatcgaaaataaatcatgtcggttctttaagtgcggcactttca
gcattacatcctatgcaatatgatccgaaagctcctaatcaaatcatggcagcggtagga
cattacaaagacaagcaagctgtcgcagtagggctaaatcactattttagtccgaacttc
atggtaaatgcaggagtagccttaggcaatgaatccaaagtaaatactatggcaaatctt
ggatttacatggaaaattggaaaaggtagtgaagaaatgccacaagaaaacttctcgacc
gaattgcaacgtttaacggctgaaaatcgagaattgaacgaaagaattcgaagattagaa
gaagctataaaaaaataa
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