Fusobacterium necrophorum subsp. funduliforme: BSQ88_09700
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Entry
BSQ88_09700 CDS
T06168
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fnf02000
]
BSQ88_09700
Transporters [BR:
fnf02000
]
Other transporters
Pores ion channels [TC:
1
]
BSQ88_09700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
AYV93919
LinkDB
All DBs
Position
complement(2035299..2041793)
Genome browser
AA seq
2164 aa
AA seq
DB search
MPVDNSLAMMRQSAAKGRFATAIGTTSAAVGDGSIALGQSSTAEGQQSIAIGSSDTVTNF
NITGKDIYEPTTSAHSKGKKSIAIGSGATSEKDNSLALGTGAKATLEDSVALGQGAATQN
GTKISNVSENSITYDNFAGTLTKENMVVSFGTTGKERQLQHVAAGKISKESTDAINGSQL
YSVIKNASWSIQNKGKEIHKVHFGDTVNFIDGDGTTAEATKDSANNNKTNVKYSVNRSSL
TVDSNTGMVSAEKKDGSHFATAEDVAKAINESEKSTTVKSADEVLVKVNETKKSTKPFET
EYTISLGDKAKNAIENVTKNKIIVTGGETEANSFTVAEGGNIKVISTGEDGIIKVGADTS
KKAITVGIDKQKFDDAVTNNKTVQENMTKITNNKEAIEDLKNNTIALAGNSGTTNSQSLS
EQAIKFNIKGDGTYLNAEAKDDTVTLSLKEKSITADRISDSAKGKLTSGTLDVTGEGNTL
GKDINIELKENSIHKKHLSDDVQLAFAGNSGSGAVKLKDGTFTIKGENGITTNASNSALI
VKIDEETKKKIDNAADTNLSNVSNEGKKVIQSLVDMEDGENTKVSSRIDGDIKKFKVNVK
ADGRVENGNQQIVTGDTVYKAIEKNKIHYFSINNPDEIEGNYNNDGATGKNAMAIGKNTG
AMGQEAIAVGTKAYAKADNTVVFGKNAVAEKSGGIAIGAEVYANMDSTIVLGKNATANKS
NSIAIGKAVHANGERSFVLGEFSTTSGENSFVVGTNSHAKGSRAVVFGSGNTSDGNNGFS
VGISNHAKADSSVAQGRNNVTEGKNSIAVGIYNVTKSNNAIAQGIDNVAEGSNSFAAGYH
NIVSKDRSMAMGINSNAHGNGAVAIGRSSTANKENGIVMGIDSHVNGDNAMAIGNHATAN
QASSVSIGKDVHANAENSVVIGRDSGTQGANSLAIGSRAFTNNKDSVVIGNEVSSTAEKT
IILGDHSYANAKNSVVIGMNSTVNAENTVSIGNASHAKGESSISFGASSVSDAKKSIALG
AESIANREAGVKGESFEAVNTEGAVWTATLGALSIGENSTKTRQITGVAAGKEDTDAVNV
AQLKQIKHNIDKNSHLNYTTDTKSGVIDFQKNEVLGILGDGEVLTYQGKENKYLSTELDE
KGNVRVHLTDKTKETLGKADTAMQSWKLQANGKDDTDVKNGELVNFKDGKNVTVVKKERE
LSFDVKGDLQDISSISNGTTKLSFSEGKNEISVHNAKITNVAAGTQDTDAVNVSQLEEAK
AAATTKVKAGTNIVSVTSEMDPVTKASTYTINAKATEVVGDGEIAVTSSTDNQTNVTTYK
IDSTALSTKVNQNKEELKRIDDDLKNGVFSVSANGAEKDNIAINENIDFSSGNENITVSY
DKSENKFTHTLSNTLKGISSIQNDKGIGFTIGDKTITFVNPSDSKQEVQLKNVADGTDPN
DAVNKGQLDKAKAAATTKVDKLDENVVVEAENNKDGSTTYKVGLANKLSIGKEETSVSLD
GDKGTLNVGKKVLIDGMTGAASFDKVVIKGDTGTIDGLTNKEWDPNKYVTGQAATEDQLK
VLDKKIQDNTEDLVNKGMNFAGNDYDETDESTIIHKNLGERFEVVGRLKSDMEASSDNIR
TRVLKDKQQLEILMSERPVFKEVTAGTDEKTKVVIGDSGIQVGGNTYISKEGMNANGKKI
TNVGAGELSSTSTDAVNGAQLYAAQKAATTKVVGDKNVTVGSVSNEDGSTTYKVSLNDKI
SLGDKIRLDGTTGNADFGKVKVNGENGEITGLTNTTTKGESFAKVGRAATEEQLKEVQDN
VTTKIDNLSTELTNKGMSFAGNSGETVHKNLGETLAVKGSGSKADDQYSSENIKTRVQNE
ELEIMLDKHLRVDTLTAKEGLDIIGKPGKDGKNTEAKIFVKEGEAGVTGTDGENMDRIVY
KDSKNREHTLATHDDGMKYGGDIGESMKKQLNETVNVRGGITDADKLSQEANIGVVSDGK
DNLTIRLAKDIKDLSSITLLDPSGNKTVIHGEGVSIIPKDGKEIKLSNKGLDNGGNKITN
IAAGTESNDAVNVGQLNEVKEVINNHAAAISNNTRKIEKMHGDMRRGFANAAAMSTLKFM
EIGMNQATVGAAIGTYKGNQAVAVGVQTAPTENIRVHANVSIAPSREQVDTMAGVGASWR
FNLK
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacaattccctagcgatgatgagacaatcagcggctaaaggaagatttgca
acggcaataggaactacttcagcagctgtaggagacggaagtattgctttaggacagtct
tccacagcggaaggacagcaatccatagcgattggaagctcagatactgtaactaacttt
aatattactgggaaagatatttacgaaccgacaacttctgctcattccaaggggaaaaaa
tcaatagcaattggatctggagctacttcggaaaaagataatagtttggcattaggaaca
ggagcaaaggctactcttgaggattcagtagctttaggacagggagctgctacccaaaat
ggaacgaaaatatcaaatgtaagtgaaaatagtattacatatgataattttgcaggaact
ttaacaaaagaaaatatggttgtttctttcggaacaacaggtaaagagagacaacttcaa
catgtagctgccggaaaaatttctaaagaaagtacagatgctatcaatggaagccaatta
tattctgtgataaagaatgcttcttggagcattcaaaataaaggaaaagaaattcataaa
gtacattttggagatacggtaaactttattgatggcgatgggactaccgcagaagctacg
aaagattcagctaataataacaaaacaaatgtaaagtattctgtaaacagatcttcttta
actgttgactctaacacaggtatggtgtctgcagaaaaaaaggatggaagtcattttgca
acggcagaagacgtagcaaaagccattaacgaatctgaaaagtcaacaacagtaaaatca
gcagatgaagttttagtaaaagtaaacgaaaccaaaaagagtacaaaaccatttgaaaca
gaatatactatttcattgggagataaggctaaaaatgctatcgaaaatgtaactaaaaat
aaaatcattgttactggtggagaaacagaagcaaattcctttactgtggctgagggagga
aatatcaaggtaatatctacaggagaagatggaattataaaagttggagcagatacaagt
aaaaaggctattacagtaggaattgataaacaaaaatttgatgatgcagtcacaaataat
aaaacagttcaagaaaatatgacaaaaattacaaataataaagaggctatagaggattta
aagaataatactattgcattagccggaaatagtggaacaactaatagtcaatcattatct
gaacaagcgattaagtttaatattaaaggtgatggaacttatttaaatgcggaagcgaaa
gacgacacagtaacattatctttaaaagaaaaatcaattactgctgatagaatttcggat
tctgccaaaggaaaattgacatccggtactttagatgttacaggagagggaaatacttta
ggaaaagatattaatattgaattgaaagaaaattctattcataagaaacatttatcagat
gatgttcaattagcttttgccggaaattcaggaagtggagcagttaaactaaaggatgga
actttcacaatcaaaggggaaaatggaatcacaacaaatgcttcaaattccgctttaatt
gtgaaaatagatgaggaaacgaaaaagaaaatagacaatgctgcggataccaatttatcc
aatgttagtaatgaaggaaaaaaagttattcaaagtttggttgatatggaagatggagaa
aatacaaaagtatcttccagaatagatggggatatcaagaaattcaaagtaaatgtaaaa
gcagatggaagggttgaaaatggtaatcaacaaattgtaacaggagatactgtatataaa
gcgattgagaaaaacaaaattcactatttcagtataaataatccggatgaaatagaagga
aactacaataatgatggagctaccggaaaaaatgcaatggcaatcggaaaaaatacagga
gctatgggacaagaggcaatagctgttggaacgaaggcttatgccaaagcagacaatact
gttgtatttggaaaaaatgccgtagcggaaaaaagtggtggaatagcgattggagcggaa
gtttatgctaatatggattctactatagtattaggaaagaatgctaccgcgaataaatca
aattctattgctattggaaaagcggttcatgctaatggagagcgttcctttgtcttggga
gagttttctactaccagtggagaaaactcttttgtagtagggacaaattctcatgcgaaa
ggaagcagggctgttgtttttggaagcggaaatacttctgatggaaataatggcttttct
gttggaatcagcaaccatgccaaagcggactcatcagttgcacaaggacggaataatgtc
acagaaggaaaaaattctatagcagtcgggatatataacgttaccaaatcgaataatgcc
attgcacaaggaatcgataatgtagcggaaggaagtaattcttttgcagcaggataccat
aatattgtaagtaaagatagaagtatggccatgggaattaatagtaatgctcatggaaat
ggagcggttgcaataggaagaagttctacagcaaataaagaaaatggaattgttatgggg
attgattctcatgttaatggagataatgctatggctattggaaatcatgctacagcaaac
caagcaagttctgtttcgattggaaaagatgtacatgctaacgcagaaaattctgttgtc
atcggaagagattcaggaacgcaaggagctaattctttggcaattggttctagagcattt
acaaataacaaagactctgttgtaataggaaatgaagttagctctacggctgaaaaaaca
attatattaggagatcattcttacgccaatgccaaaaattcagtagtaattggaatgaat
tccactgtcaatgcggagaatacagtatctattggaaatgcaagtcatgcaaaaggagaa
tcttcgatatcttttggagcttcttctgtttctgacgcaaagaaatctattgccttagga
gcagaatccatagcaaatcgagaagcgggagtcaaaggggaaagctttgaagctgtgaat
acggagggagcagtttggacagcaaccttaggagctttatctattggagaaaatagtacg
aaaacgcggcaaattaccggagttgcagccggaaaagaagataccgatgctgtcaatgtg
gctcaattaaaacaaataaaacacaacatagataaaaacagtcatttgaattacacaaca
gatacaaaatcaggagttattgattttcaaaaaaatgaagtattaggaattttaggagat
ggagaagttcttacttatcaaggaaaggaaaataaatacctttccacagaacttgatgaa
aaaggaaatgtacgagttcatttaacggataagacaaaagaaactttaggaaaagcagat
actgcaatgcaatcttggaaattacaagcaaatggtaaagatgatacagacgttaaaaat
ggagaacttgttaattttaaagatggtaaaaatgtaactgtagtaaaaaaagaaagagag
ctttcttttgatgtaaagggagatttacaagatatttcaagcatttctaatggaactact
aagctttctttttctgaaggaaagaatgaaataagtgttcataacgcaaaaattacgaat
gtagcggcaggaactcaagatacagatgcggttaatgtaagtcagttagaagaagcgaaa
gcggcagcgactacaaaagtaaaagcagggactaatattgtatctgtgacttcggaaatg
gatcctgtgacaaaagcaagtacttatacaatcaatgcaaaagcaacggaagtagttgga
gacggagagatagcagttacatcgtcgacagataatcaaacgaatgtgacaacttacaag
atagacagtactgctctatctactaaagtgaatcaaaacaaggaagagcttaagagaatt
gatgatgatttgaaaaacggagtttttagtgtaagtgccaatggagcggagaaagataat
attgcaatcaatgaaaacatagattttagtagtgggaatgaaaatattacagtgagctat
gataaatctgaaaataaatttactcatactttgtcaaataccctaaaagggatatcttcg
attcaaaatgataaaggtatcggatttactataggggataagacaattacttttgttaac
ccttccgactcaaaacaagaggtacagttaaagaatgtagcggatggaacagatccgaat
gatgcagtgaataaaggacaattggacaaggcaaaagcggcagcaacaacgaaagtggat
aaattagatgagaatgttgttgtagaagcggagaacaacaaagacggttccactacttat
aaagtaggactggcaaataagctttctatagggaaagaagagacttctgtttctttagat
ggagacaaaggaactttgaatgtcggtaagaaagttcttatagatggaatgaccggagcg
gcatcttttgataaagtagtgattaaaggagataccggaactattgacggtttgacgaac
aaagaatgggatccgaacaagtatgtgacagggcaagcggcaaccgaagatcaattaaaa
gttctggataaaaagatacaggataatacagaagacttggttaacaaaggaatgaatttt
gcaggaaatgattacgatgagacagatgaaagtacaataattcataaaaatctgggagaa
cgttttgaagttgtaggaaggctaaagagtgatatggaagcttcttctgataatatcaga
acacgtgttctaaaagataagcagcaattagaaattttgatgtcagaaagacctgtattt
aaagaagtaacagcaggtactgacgaaaaaacaaaagtagtgattggagattccggaata
caggtaggaggaaacacctatatttctaaggaaggaatgaatgctaatgggaagaaaata
acgaatgtcggagccggagagctaagttccacttctacggatgctgtcaatggagctcaa
ttgtatgccgctcaaaaagctgccactacaaaagtagtaggcgacaagaatgttactgtt
ggaagtgtaagcaatgaagacggttctactacttacaaagtttccttgaatgataaaatt
tcattgggagataaaattcgtttggatggaacaacaggaaatgctgattttggaaaagta
aaagtaaatggagagaatggagaaattacaggtctaacaaataccacgacaaagggagaa
agctttgcaaaagtgggaagagctgctacagaagagcaattgaaggaagttcaagataat
gttacgacaaaaatcgataatctttctacagagcttacgaataaaggaatgagttttgcc
ggaaatagtggagaaactgtacataagaatctaggagaaaccttagctgtaaaaggatcc
ggaagcaaagccgatgatcaatattcttctgaaaatatcaaaacgagagtacaaaatgaa
gaattggaaatcatgttggataaacatctaagagtagacacattaaccgcaaaagaaggt
ctggatattataggaaaacccggaaaagatggtaaaaatacggaagctaaaatattcgtc
aaggaaggagaggcaggagttaccggaacagatggagaaaatatggaccgaattgtttac
aaagactctaaaaatagggaacacactcttgcaacacatgatgacggaatgaagtatggt
ggagatatcggagaaagtatgaaaaagcaattgaatgaaacggtcaatgtgcgaggaggt
attacagacgcagataaattatcccaggaagcaaatattggggttgtttcagatggaaaa
gataatttgaccattcgacttgcaaaagatattaaagatttatccagcattaccttatta
gatccttcagggaataaaacagttattcatggagaaggggttagtattattccaaaagac
ggcaaagaaattaaattatcaaacaaaggcttagacaatggagggaataaaattaccaac
atagcagccggaacggagagcaatgatgctgtcaatgtaggacaattgaatgaagtaaaa
gaagtaatcaataaccatgctgctgcaatcagtaataataccagaaaaattgaaaaaatg
catggagatatgcgaagaggattcgccaatgcggcagcaatgtccactttgaaattcatg
gaaatcggtatgaatcaggcgacagtaggagcagctattggaacttataaaggaaatcaa
gctgtagcagtaggggtacaaacggctcctaccgaaaatattagagtacatgctaatgtt
tcgattgctccaagtcgggaacaggtagatactatggcaggagttggggcatcttggagg
ttcaacttaaaatag
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