Fusobacterium necrophorum subsp. funduliforme: BSQ88_09780
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Entry
BSQ88_09780 CDS
T06168
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Pathway
fnf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSQ88_09780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fnf03021
]
BSQ88_09780
03400 DNA repair and recombination proteins [BR:
fnf03400
]
BSQ88_09780
Enzymes [BR:
fnf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSQ88_09780
Transcription machinery [BR:
fnf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSQ88_09780
DNA repair and recombination proteins [BR:
fnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSQ88_09780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AYV93935
LinkDB
All DBs
Position
complement(2055717..2056697)
Genome browser
AA seq
326 aa
AA seq
DB search
MLKIEKHARGIHITEVRESAFKGQFVVEPLYRGYGHTLGNALRRVLLSSIPGAAIKGIRI
EGVLSEFSVMDGVKEAVTEIILNVKEIVVKSETAGERKMILSVKGPKVVTAADIIPDIGL
EIINPEQEICTITTDRSLDIEFLVDTGEGFVVSEEIERDGWAVDYIAVDAIYTPIRKVSY
EIQDTMVGRMTDFDKLTLSVETDGSIEIRDALSYAVELLKLHLDPFLEIGNKMENLRLEV
EEEMENQSSSMKDDINLNIKIEELDLTVRSFNCLKKAGIEEVGQLSKLSMNELLKIKNLG
RKSLDEILEKMKELGYDLTQNGSTES
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaattgaaaaacatgcaagaggtattcacattacggaagtaagagaaagtgct
tttaaaggacaatttgtggtagaacctttgtatcgagggtacggacataccttagggaat
gcattacggcgagttttgctttcttctattccgggagccgcgattaagggaattcgaatt
gaaggtgttttaagcgagttttctgttatggatggagtaaaagaagctgtaactgaaata
attttgaacgtaaaagaaatcgtagtgaaatcagaaactgctggagaaagaaagatgatt
ctttctgtcaaaggaccaaaagtggtaacagcagcggatattattcctgatattggactt
gaaattataaatccggaacaagaaatctgtaccattacaacagatagaagcctagatatt
gaatttttagtagatacgggagaaggatttgtagtatcagaagaaattgaaagagacggt
tgggcagtggattatattgctgtagatgcaatttatacaccaattcgaaaagtttcttat
gagattcaagataccatggttggaagaatgacagattttgataaattgactttgtctgtg
gaaacagatggaagtattgaaattcgagatgctctttcttatgcagtcgaattattaaaa
ttacatttagatccgtttttagaaattggaaataaaatggaaaatctaagattagaagtg
gaagaagaaatggaaaatcaatcttcttcgatgaaagatgatatcaatctaaatatcaaa
attgaagagttggatttaaccgttcgttcctttaactgtttgaaaaaagcgggaattgaa
gaagtaggacaattatcaaaactttctatgaatgaattgctaaaaattaagaatttagga
agaaaatccctagatgaaatcttggaaaagatgaaagagttgggctatgatctgactcaa
aacggatctacagaatcataa
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