Fervidobacterium ngatamarikiense: JM64_00900
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Entry
JM64_00900 CDS
T10794
Name
(GenBank) RNA polymerase subunit sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fng Fervidobacterium ngatamarikiense
Pathway
fng02020
Two-component system
fng02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fng00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM64_00900
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JM64_00900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fng03021
]
JM64_00900
Transcription machinery [BR:
fng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JM64_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_3
HTH_36
HTH_38
Xre-like-HTH
HTH_17
RepL
LacI
Motif
Other DBs
NCBI-ProteinID:
ANE40743
UniProt:
A0A172T1L8
LinkDB
All DBs
Position
complement(192075..192989)
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AA seq
304 aa
AA seq
DB search
MPNSKRNNNSQTPRLEQKLLLTKTERFYLNILELPYHILREKYLPVVEIDDTYHPYSEDL
HEVLVKLLPYLGLTDQEEKVAEYIIYNIDSSGKLRITPLELAEKFNIQVQQAKELIDLIF
TEFAEEIQQNTVNENLMYIEPDIIMTPEKVEVRKIEVKDPIIAKALQMREETLFRICEEI
RKVNEYFLRGYRKYPQIFTMRYMARLLGVHVSTISRAVRNKHVSTPLGILPLRFFFGRIL
NKKIVLQEIEKLLKLDSELTDAHITLVLKSAGIQISRRTVNKYRRMLETLENNQEDKTTS
STGG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatagcaaaagaaataacaactctcaaactccaaggttagaacaaaagctatta
ctcacaaaaacggagaggttctatcttaacatacttgagctaccgtatcacatcttgcgt
gagaaatacttacctgtggttgaaatagacgacacatatcatccatattctgaagacctc
catgaggtcttagtcaagttgttaccataccttggactaaccgaccaagaagagaaagta
gctgaatacataatctacaacatcgacagttcaggaaaactaaggattacacctctggaa
ctggcagaaaaatttaatatccaagttcagcaagccaaagaacttattgacctaattttc
acagaatttgcggaagagattcagcaaaacacagttaatgaaaatctcatgtacatcgaa
ccggatataataatgaccccagaaaaggtagaggttcgaaagatagaagtaaaggaccca
ataatagctaaagcgttacaaatgagagaagaaacactctttagaatttgcgaagaaata
cgtaaggtaaatgaatactttctcagaggctacagaaaataccctcagatatttaccatg
agatacatggcaagactcttaggggtgcatgtttcgaccattagtagagctgttagaaat
aaacacgttagcacaccactagggattcttcctctaaggttcttttttggaagaatactc
aacaaaaaaatcgtgctgcaagaaatcgaaaaactgctcaaattggacagtgaattgaca
gatgcccacattacacttgtactcaaatcagcaggtatccaaatatcgcgcagaacggtt
aataaatacagaagaatgttggaaactttagaaaataatcaagaagataaaacaacatct
agtacaggaggatga
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