Fervidobacterium ngatamarikiense: JM64_04440
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Entry
JM64_04440 CDS
T10794
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fng Fervidobacterium ngatamarikiense
Pathway
fng03030
DNA replication
fng03410
Base excision repair
fng03420
Nucleotide excision repair
fng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JM64_04440
03410 Base excision repair
JM64_04440
03420 Nucleotide excision repair
JM64_04440
03440 Homologous recombination
JM64_04440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fng03032
]
JM64_04440
03400 DNA repair and recombination proteins [BR:
fng03400
]
JM64_04440
Enzymes [BR:
fng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JM64_04440
DNA replication proteins [BR:
fng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JM64_04440
DNA repair and recombination proteins [BR:
fng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JM64_04440
NER (nucleotide excision repair)
GGR (global genome repair) factors
JM64_04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANE41311
UniProt:
A0A172T2W0
LinkDB
All DBs
Position
complement(950519..953212)
Genome browser
AA seq
897 aa
AA seq
DB search
MARAFLFDGTGLLYRAFYAIDQSLSTTTGIPTGALYGLARMLLKFIKEHITVGEDYCVFV
VDVKGGSTYRRELYEKYKAHRPETPEPLLRQINLVGELIEGFGIKLVRMPGYEADDVIAT
LAKRFEKEKGLLEISEINVVTSDKDLLQLVNENISVWRIEKGVTDIRKYTVRDVYERYGV
YPHQIVDYLALVGDASDNIPGVPGIGEKTAVKILQDFGSVENALKNQDKLPDKIREKLLG
YYEDYELSRKLVELNYEIELPINLKELKYQGYDSAKLLEVLKKFEFASIIKELQLSASLE
KAVEYNVISKENELKGLLEEILKAKKVALDLETSSLDPFTGKIVGISIAIDEGRAYYIPV
AHLDGPNLPLDKVKEFLKEVVGARRFGGHNLKFDIKFLKRAGIEPEYPAFDTMIEAYVLN
PNEKRFNLDEMALKFLGYKMMSYDEVMQGALPLFAGDFSYVPVERAARYSCEDADISLRI
HNKLYPLIYSNEMVELYEKIELPLVSVLAQMELNGVFFDTKYLSSLSLEMEKKLSSLSQR
IFEIAGEPFNLNSPKQVGYILFEKLKLPAMKSTNTGAYSTDVEVLENLAPDFEIARLLLE
YRKIQKLKSTYVDAIPTMVNKHTGRVHASFNQTGTATGRLSSSDPNLQNLPGRTDEGKEI
RTAVKPQKENWWILGADYSQIELRVLAHMSEDEELIRAFSENRDIHLETAKRIFGVSDEF
VNESMRRIGKMVNFAIVYGVSPYGLSRRIGLDVKETRRIIDAYFNTYKGVQSYIATIKEF
ARKNGYVKTMFGRRREVPQINAKDPNIRAEGERIAINTPIQGTAADIMKIAMIKIHERMK
KENLKSMMILQIHDELVFEVPDDELELMKEIVKSEMENAVKLRVPLLVDIYVEKYML
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagcatttctatttgacggaacaggtctactttacagagctttttatgccata
gaccaatccttatcgaccacaaccggtattccaaccggagcactttatggtttggctcga
atgttgctaaagtttataaaagaacacataacagtaggtgaagactactgtgtttttgtt
gtggatgtaaaaggtggtagtacatatagaagagaactttacgaaaaatacaaagcgcat
cgccctgaaactcccgaaccgttgcttagacagattaatcttgtgggcgagctaatagaa
ggttttggaatcaaacttgttcgtatgccaggttacgaagctgacgacgtgatagccaca
ctggctaaaagatttgaaaaagaaaaaggtttgttggaaatctcggaaataaacgttgta
acaagcgataaagacttgctccaacttgtgaacgaaaatatttcagtatggcgtatagaa
aaaggtgtaaccgatatcagaaaatacactgtaagagatgtttacgaacgatacggagtc
tacccgcatcagatagttgattaccttgctttagttggtgatgcttcagataacatccca
ggagtgcctggcataggtgaaaagacagcggtgaagatactacaagactttggaagcgtg
gaaaatgcgctaaaaaaccaggacaaattaccggataagattagagaaaaacttttgggt
tactatgaggactatgaactgagcagaaaactcgtagaactgaattatgagattgagttg
ccaatcaatttgaaggaactgaaataccaaggttatgactcggcaaagttgttggaggtt
ttaaaaaagtttgaatttgcgagtataataaaagaattacaattgagcgcttcacttgaa
aaagcggttgagtacaatgtcatctcaaaagaaaatgaactcaaaggattgcttgaagaa
atactcaaagcaaagaaggtagcacttgatttagaaaccagttcccttgacccattcaca
ggtaagatagtaggcatttccatagctattgacgagggcagggcctattacataccagtg
gcacatttggatggaccaaaccttccactcgataaagtcaaagagttcttaaaagaagtt
gtcggcgcaaggagattcggaggtcataatctaaaatttgatatcaaatttttgaaaaga
gcgggcatagaacctgaatatcccgctttcgacactatgatagaggcttatgtgctgaac
ccgaacgaaaagaggttcaacctcgatgagatggctttgaagttccttgggtacaagatg
atgagttatgacgaggtcatgcagggtgcactgccgctttttgctggcgatttctcatat
gtgcctgttgaacgtgcagcgaggtattcttgtgaagatgcagatatatccttgcgcatt
cataacaagctctatcctcttatatactcaaacgaaatggttgaactctatgaaaaaatc
gaattaccccttgtctctgttttggcacagatggaactcaatggtgtgttctttgacacg
aaatatctttcttcgttgtccttggaaatggagaaaaagctatcttcactttcacaaagg
atatttgaaatagcaggagagccatttaatctgaactcaccaaagcaggttggctacata
ttgtttgaaaaattgaaacttcctgcaatgaaatcaacaaatactggcgcttattcaaca
gatgtggaggttttagaaaacttggcgcccgactttgagattgctcgtctgctactggaa
tatcgaaagatacagaaactgaaaagtacgtacgtagatgctataccaacgatggtgaat
aaacacaccggtcgagtccacgcctctttcaatcagactggaactgcaactggcaggttg
agcagttcagaccccaatttacagaatctgccagggagaacggacgaaggaaaagaaatt
agaacggctgtaaaaccacaaaaggaaaattggtggattcttggagcggactactcacag
attgaactgagagttttggcgcatatgagcgaagatgaggaacttattagagccttcagt
gaaaacagagatattcatttagagacagcaaaacgaatattcggtgtgagcgacgaattt
gtcaacgaaagtatgagaagaatcgggaagatggtcaattttgcaatagtttacggtgtg
tcaccttacggtttgtcaagaaggataggcttagacgtaaaagaaacaagaagaataata
gatgcttactttaacacctacaagggtgttcagagctacatagcaacgataaaagaattt
gcgaggaaaaacgggtatgttaaaacgatgtttggcagacgaagagaagtaccacaaata
aatgcaaaggatccaaacatcagagctgagggcgaaaggattgctataaatacaccaata
caaggtaccgcagcagatataatgaagatagctatgataaaaatacacgaaagaatgaag
aaagagaatttaaagagcatgatgatacttcaaatacacgatgaattggtatttgaagta
cctgatgatgaacttgagttaatgaaagaaatcgtcaaatctgagatggagaatgccgta
aaactgagagttcccttgctggttgatatttacgtggaaaagtacatgttgtga
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