Fervidobacterium ngatamarikiense: JM64_04620
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Entry
JM64_04620 CDS
T10794
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fng Fervidobacterium ngatamarikiense
Pathway
fng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JM64_04620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fng03400
]
JM64_04620
Enzymes [BR:
fng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JM64_04620
DNA repair and recombination proteins [BR:
fng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JM64_04620
RecFOR pathway proteins
JM64_04620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
NTPase_1
AAA_14
MCM
AAA_22
AAA_3
ResIII
IstB_IS21
AAA_18
nSTAND3
Sigma54_activat
TIP49_C
RNA_helicase
NB-ARC
Sigma54_activ_2
DUF815
AAA_25
AAA_2
Resolvase
ABC_tran
TsaE
NPHP3_N
HTH_AsnC-type
bpMoxR
Rad17
AAA_17
CggR_N
AAA_33
Cdc6_lid
NACHT
DnaB_C
AAA_24
AAA_11
AAA_19
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ANE42253
UniProt:
A0A172T610
LinkDB
All DBs
Position
complement(992654..993649)
Genome browser
AA seq
331 aa
AA seq
DB search
MFSPERNAYDTYSLRPKFLSEYIGQDNIKERLKLAISASKMRGEQLDHILLAGPPGLGKT
TLAVVIANELNANIHITSGPVLEKQGDLAAILTNLERGDVLFIDEIHRMSRSVEEILYSA
MEDFQIDIMIGKGPAARSIRVDLQPFTLIGATTRSGLLTSPLRNRFGMIFEMSFYTQEEL
SLIITRAAQVMEVMIEPEAALLIARRSRGTPRIAIRLLKRVRDLSTVKGSKVIDTETVNE
VMNLLGIDEYGLDEMDRKLLKVIIEVYKGGPVGLKALAASLGITEDTIAEVYEPFLVQSG
FLARTARGRMVTEKTYKYFGMNTLGGLFGDY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atattttcacctgaaagaaatgcttatgatacgtactctctaaggcccaagttcttgtct
gaatatataggtcaagataacatcaaagagcgtttgaaacttgcgatatctgcttcaaag
atgcgtggtgaacaacttgaccatatacttttggctggtcctccaggacttggaaagaca
acacttgccgttgtcattgctaacgagctcaatgctaatatccatattacaagcggtcct
gttcttgaaaagcaaggagacctcgcagcgatattaacgaatcttgaacgtggcgatgtt
ctatttatcgatgaaattcacagaatgagtagaagtgtcgaagagatactttattccgct
atggaagattttcagattgatataatgattggaaaaggacctgccgcaaggtctataaga
gtggatttgcaaccatttacccttattggtgcaacaacgcgaagtggattgcttacttca
cctctaaggaacaggtttggtatgatatttgaaatgagtttctacacacaggaagagctt
agtttaataataactcgagcagcccaggtaatggaggtcatgatagaaccagaagctgct
ctgttaattgcacggcgttcacgtggaacaccaagaatcgcaattaggttgttgaaacgt
gttcgagacttgagtactgtgaaaggctcgaaagtcatagatacggaaactgttaacgaa
gttatgaatctgctcggaatcgatgagtacgggttggacgagatggatagaaagcttttg
aaagtcattatcgaagtttacaaaggtggacctgtcggactgaaagcgcttgctgcttcg
ttaggaattacggaagataccattgcagaagtatacgaaccatttcttgtgcaaagtggt
tttttggcaagaacggctcggggaaggatggtaactgaaaagacttacaaatatttcgga
atgaacacattggggggacttttcggtgattactga
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