Fervidobacterium ngatamarikiense: JM64_05285
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Entry
JM64_05285 CDS
T10794
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fng Fervidobacterium ngatamarikiense
Brite
KEGG Orthology (KO) [BR:
fng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fng03400
]
JM64_05285
Enzymes [BR:
fng01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JM64_05285
DNA repair and recombination proteins [BR:
fng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JM64_05285
Prokaryotic type
JM64_05285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
YlbE
Motif
Other DBs
NCBI-ProteinID:
ANE42279
UniProt:
A0A172T5H4
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All DBs
Position
1124320..1125681
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AA seq
453 aa
AA seq
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MRVLKIVERHFSIKGPVVYWMQRDQRAFDNWALLYAQLLALKNNVGLIVVFNIVPSFLNA
PLRHYDFMLQGLFQTRAFLEESNVPLVFTFGEPAREIYKLINEVNACALVTDFNPLRIVK
NWKENLIRVLNIPVYEVDAHNVVPAFFVSQKQEYGAYTLRPKIKRYLQEFLTSFPTAKKM
PAANLEFGKLSNLNKFEEILKKLDVDRSVAPVNWLKPGFIEGMKLLAEFSRKKLKFYSEL
RNDPTEDATSNLSAYLHFGQIAPQRVALEVIKYESDYPESVADFLEELIVRRELADNFCL
YNANYDSFNGFPEWAKKSLNVHKNDKREYVYSLEELEYAKTHDNLWNAAQLEMVKKGKMH
GFLRMYWAKKILEWTRSPEDALNFAIYLNDKYELDGRDPNGYTGIAWAIGGVHDRPWKER
PIFGMVRYMSYEGCKRKFNIEKYIQYVESIKND
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
attcgggttttaaaaatagtagaaaggcatttttcaattaaaggtcctgttgtctattgg
atgcaacgtgaccaaagagcttttgataattgggctttgttatacgctcagttgttggct
ttaaaaaacaacgttgggttgatagtggttttcaacatcgtgccatctttccttaatgct
cctcttaggcactacgacttcatgctccaaggtctttttcagacaagggcttttttagaa
gagtcaaatgttcctttggtttttacctttggagaaccggctagggagatttacaaattg
ataaatgaggtcaacgcctgcgctttagtaaccgattttaacccactgaggatagtaaaa
aattggaaagaaaacctaattcgagttttgaatattcctgtgtacgaagtggatgcacac
aatgttgttcctgctttcttcgtttctcaaaaacaagagtacggagcttacacgttaaga
cctaagataaaaaggtatctgcaagagtttctaacatccttcccaactgctaagaagatg
cctgcagccaatttggagtttgggaagttatctaatctcaataaatttgaggagattttg
aaaaagttggatgtagataggtctgttgcacctgtaaattggttaaaaccagggtttatc
gaaggtatgaaactgcttgcggagttttcaagaaagaaactgaagttctacagtgagctt
cgaaacgaccctacagaggatgcaacatcgaatctttccgcttatctacactttgggcaa
attgctccacaacgtgtagccttggaggtgataaaatacgagtctgactatccagaaagt
gttgcagattttttagaagagcttattgttcgcagagaactagccgataatttttgcttg
tataacgcaaattacgattcgttcaacggttttcctgaatgggcgaagaaatctctgaac
gttcacaagaatgataaacgagagtatgtatattcgcttgaagaacttgaatatgcaaaa
acacacgataatttatggaatgcagcgcagttggaaatggtgaagaaagggaagatgcac
ggatttttgagaatgtattgggcgaagaagatacttgaatggacacgttcgccagaagat
gcgttgaattttgcaatatatctcaacgataagtatgaacttgacggtagggaccctaac
ggatacacaggaatcgcctgggcaatcggcggtgttcacgataggccttggaaagaaaga
cctatttttgggatggttaggtatatgagctatgaaggttgcaaaaggaagttcaacatt
gaaaagtatatacagtatgttgaaagcatcaaaaatgattaa
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