Fervidobacterium ngatamarikiense: JM64_07555
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Entry
JM64_07555 CDS
T10794
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fng Fervidobacterium ngatamarikiense
Pathway
fng03020
RNA polymerase
Brite
Enzymes [BR:
fng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JM64_07555
Transcription machinery [BR:
fng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JM64_07555
DNA repair and recombination proteins [BR:
fng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JM64_07555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ANE41822
UniProt:
A0A172T4G3
LinkDB
All DBs
Position
complement(1622430..1627382)
Genome browser
AA seq
1650 aa
AA seq
DB search
MSSSFKRKIAKVKVAVASPEVIRSWSSGEVKKAETINYRTFKPERDGLFCERIFGPVKDY
ECACGKYSGKKYEGTVCEKCGVRVESRDARRRRFGHIELAAPVTHVWYLKNTPSVIATLL
DMTVKDIENIVYFGSRRVNERVLIVTDPKNTPFVKGSILNQTEYEIYAKKWDFEVSPAYI
VKEPRTPLVADIDGEVHIKHERTHTDRDIYWITIRNIIRTELRVYSGMELRVKDGDFVNQ
GDEIVSEKRVDAIFAPFDGTVEVDEVSETITLNPLPTSKNTPITFTLPYGVRALVKNGDK
IKKGQQLTTETILPRIIAPLSGTVKFSRNLNLRPLENGSYEVITTGTIYIENVQSSKTYP
VFEGATIYVQDGEMVKAGDVIADRFLFEDEKLSIEEYKIFSQHYHGMFVVEEQVENDKPI
MVVTYIDPQIAEETGITRGQIITQQDYEAYSMIYPGKIEAETGAAAIKKLLQQLDLEVMK
TELENELNKIPKSSVRAKKLLKKLRIVKDLMESGTKPEWMVLEVLPVVPPEIRPMIQIDG
GRFATTDLNDLYRRVIMRNNRLKRLYEMNAPEVIIRNEKRMLQEAVDNLIYNGKIGKAYT
DRNGRPLKSLTDLIRGKKGRFRRNLLGKRVDYSGRAVIVVGPHLKIHECGLPKKMALELF
EPFVIAELSKEENAEATQTKVKKYRKELQREDPKAWEKLEKVIQGRVVLLNRAPTLHRMS
IQAFEPKLIEGNAIQLHPLVCPPFNADFDGDQMAVHLPLSPAAQAEARLLMLSRYNIISP
AHGKPISMPGKDIVAGIYYLTMVDKNYDKVQPEDIKWKFASPEEAEIAYEFGYIKLHEPI
LVKIDDKVIKTTFGRVIFNSILPEELRDYNKTFGKNGIKDVVYKTFKKHGIDRTADLLDD
IKTLGFHYATISGLTVSLKDFLISPKKNEIITEAMKKIDEIERLYEEGLLSDEEKYKETI
KIWTKATDLVQEETYKYLGENPFNPVFIMVDSGARGNKDQLKQLSGMRGLMADPSGRTIE
IPILSNFREGLSVLEFFISTHGARKGSADTALRTSSAGYLTRRLVDVVQSVVITQPDCGT
HEGVRAAILKSSDNFVVEKIEDFIFGRVLAKDVYEPGSGSILVNPETGKVYQRDTVILDD
DAKFLSNYKKRVPVVEEKVLDLSDINIPEVYTELAEDVDLGTEVLPAESELNWEIIKKLR
DARVKSVKVKLYPIVGNVVAEEVVWDKERKKQLAVEEEQIDVTVAKMLEENNIDSIVVRP
EIYVRSPLTCEAEHGVCAKCYGLDLSNHKVVSVGESVGIVAAQSIGEPGTQLTMRTFHTG
GIATTADITQGLPRVEELFEARKKTKDPEGIFSKVKGVVVDISQDEPKKIYVQDELGTMH
EYVVPSRVRVNVSVGQKVLPGQSLTTGSLKVRKILEELGVEDTAMYLLREIKKVYVQQGV
DIHDKHFELIIRQMLNKAEVIEPGDTDFLPGDLVPITILNKVNREIMEGNAKIELNRKRV
IGKVLAKHILIKNEEGQVVELAKEGEEITEELLEQLIKYNVKDVLVINHGKEKEVYQIMP
KETVKYRRKLLRITQASLEYEGWLSAASFQQTQQVLTDAAIKGAVDYLKGLKENVIVGQL
IPAGTGFEIFANIQYEETPRHALEEKEKLA
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttctttcaaaaggaaaattgcgaaagtaaaagtggcggtggcatcccccgaa
gttatcagaagctggtcaagtggagaagtgaagaaagcagaaacgataaactaccgtacc
ttcaaaccagaaagagatggactattttgcgaaagaatatttggacctgtaaaagactat
gaatgtgcttgtggaaagtacagtggtaaaaagtacgaaggtacagtttgtgaaaaatgt
ggagttagggtcgaatcaagagatgcaagaaggcgccgatttgggcatatcgaattggct
gctcctgttacgcatgtctggtatcttaaaaacactccaagtgtcatcgccacgttactt
gacatgacagtaaaggatatagaaaacatcgtctattttggtagtagaagggtaaacgaa
agggtccttatagtcaccgacccaaagaacacaccttttgtgaaaggctctatattgaac
caaactgaatacgaaatctacgcgaaaaaatgggattttgaagtgtcacctgcatatata
gtaaaagaaccaaggactccgcttgtagctgatatagatggtgaggttcatataaagcat
gaaagaacacacacagacagagatatttattggataacaataaggaacattataagaacc
gaactacgtgtttacagcggaatggaactcagggttaaagatggagatttcgtcaaccaa
ggtgatgaaatagtctcagaaaaaagggtcgatgccattttcgcaccatttgacggaacc
gtagaagtcgacgaagtttcagaaactattactcttaatcctctcccaacaagtaaaaat
acaccgataacattcacgctaccatacggtgtaagagcattagtgaagaatggagataaa
ataaagaaagggcaacaattgacgacagaaactatattgcctcgtatcatagcaccgttg
tcaggaactgtgaagtttagcaggaaccttaacctgagacctcttgaaaacggaagctac
gaagtcattacaactggaacaatatacattgagaatgtccagtcatccaaaacgtatcct
gtttttgaaggagcgactatatatgttcaggacggggaaatggtaaaagctggcgatgtt
attgccgacagattcctcttcgaagatgagaaactatctattgaagagtacaaaatcttc
agccagcactaccatggcatgtttgttgttgaagaacaagttgaaaacgataaaccaata
atggtggtcacatacattgacccacagattgcggaagaaactggtatcacaagaggtcaa
ataatcactcagcaagattacgaagcttacagcatgatatacccaggaaagattgaagct
gagactggagctgcagcaatcaagaagctgttgcaacaacttgatctcgaagttatgaaa
accgagctggaaaacgaacttaacaaaattccaaaaagcagcgtaagagccaagaaattg
ttaaaaaaactaagaatagttaaagatttaatggaaagtggaacaaaacctgagtggatg
gttctggaggtcttgccagttgttccaccagaaataagaccaatgatacagatagatggt
ggacgtttcgcaacaacagacctcaatgacctttacagaagggtcataatgagaaacaat
cgactcaagagattgtatgaaatgaatgcacctgaagtcataatcagaaacgaaaagcgt
atgttacaagaggccgttgataatctgatatacaatggaaaaattggaaaagcttataca
gatagaaatggtagacctttgaaatcacttactgatctcattagaggaaagaaaggacgc
ttcagaagaaatctacttggtaaacgtgttgactattcaggtcgagccgttattgtcgtt
ggtcctcatctgaagatacacgaatgtggtttgccaaagaagatggctcttgaactcttt
gaaccgttcgttattgccgaactttcaaaagaggaaaatgcggaagctacacagacaaaa
gttaaaaaatacagaaaagaactccaaagagaagacccgaaagcttgggaaaaacttgag
aaggttattcagggaagggttgtcttactcaacagagctccaacactgcacaggatgtct
atccaagctttcgagccaaaacttatagaaggtaacgctatacaactgcatccactggta
tgtccaccgttcaacgcagacttcgatggtgaccagatggcagtccatctaccgctttcg
ccagcagcgcaagcggaagcaaggttactaatgttatcaaggtacaacataatctccccg
gcacatggaaaacctatatcgatgcccggtaaggatattgttgccggtatttactaccta
acgatggtcgataagaactacgataaagttcaaccggaagatatcaaatggaaattcgca
agcccagaggaagcggaaatcgcttacgaatttggttacataaagctacatgaaccaata
cttgtcaaaattgacgataaggtcataaaaacaacattcggtagagtcatattcaactcg
attcttccagaggaactcagagattacaacaaaacgttcggaaagaacggaatcaaagat
gttgtttacaaaactttcaaaaagcacggtattgataggacagcagacctgcttgatgat
ataaaaacgcttggattccactacgccacgatttccggtttaacggtcagtttgaaagac
ttcctcatttctccgaagaaaaacgaaatcatcactgaagcgatgaaaaagatagatgag
atagagagactttacgaggaaggtttactgagcgatgaagaaaaatacaaagagacgata
aagatttggaccaaagccacagatttggtccaagaagagacctacaaatatctcggtgaa
aatccattcaacccggtgttcataatggttgattccggagctaggggtaacaaagaccag
ctcaaacaactttctggtatgcgtggtcttatggcagacccatctggtagaaccattgaa
attccgattctttcaaacttccgagaaggactctcagtccttgaattctttatcagtaca
cacggtgcgagaaaaggttcagccgataccgcgttgcgaacaagctctgctggatacctt
acaagaaggctcgttgacgttgttcagagcgttgtaatcacacaaccagattgtggaacg
cacgaaggtgttagggcagcgatacttaagagttctgacaacttcgttgttgaaaaaata
gaagatttcatattcggtcgagtgttagcaaaggacgtctacgaaccaggaagcggcagc
atattagttaacccagaaacaggaaaggtttaccagagagatacagtgatacttgacgat
gatgctaagttcttgtcaaattacaaaaagagagtccctgttgttgaagaaaaagttctc
gatttgagtgatattaacattcctgaggtttacacggaacttgctgaagatgtcgacctt
ggcacagaagttctgccagctgaaagtgaactcaactgggaaatcattaaaaagttaaga
gacgcgcgtgttaaatctgtaaaagtaaaactctacccaatcgttggaaacgtagtagca
gaggaagttgtttgggacaaagagcggaaaaaacaacttgccgtagaagaagaacaaata
gatgtaacagttgcaaaaatgctagaggaaaataacatagacagcattgtagttagaccg
gaaatctatgttcgctcaccactcacatgcgaagctgaacacggtgtatgcgcgaaatgt
tacggtcttgacctatcgaaccataaagttgtaagcgttggtgaatctgtaggtatcgtg
gcagctcaatctatcggcgaaccgggtacacagctcacaatgaggacgttccacacaggt
ggtatcgctacaactgctgacatcacacaaggtttgccaagagttgaggaactcttcgaa
gcaaggaaaaagacaaaagatccagaaggtatattctccaaagttaaaggcgttgtagtt
gatatctctcaagacgaaccaaagaagatttacgtacaagacgagcttggaaccatgcac
gaatacgttgttccatcaagggtgagagtaaacgtatccgttggtcaaaaagtcttaccc
ggtcagtcgctcacaacaggttctctcaaagtgagaaagattctcgaggaacttggagta
gaagacactgcgatgtacctactaagagaaattaagaaagtctacgtacagcaaggtgtc
gatatccatgataagcattttgaactgataattaggcagatgcttaacaaagccgaagtc
attgaaccaggcgataccgacttcttaccaggagaccttgtaccaatcactattctcaac
aaagttaatagagaaataatggaaggcaacgcgaagatagagctcaacaggaaacgcgtt
atcggaaaagtactcgcaaagcatatcctaataaagaacgaagaaggtcaagttgtagaa
cttgcaaaagaaggggaagaaataacagaagaactcttggaacaactcatcaagtataat
gtaaaagatgtccttgtaatcaaccatggcaaggagaaagaagtttaccagataatgcca
aaagaaactgtgaaatacagaagaaaactactcagaattacacaggcatctcttgaatac
gaaggctggctgagcgcggcaagcttccagcaaacgcaacaagtattaacagacgcagca
atcaaaggtgcggtcgattacctcaaaggtttgaaagaaaacgttatcgttggacagctc
atacctgctggaacaggatttgaaatatttgcaaacattcagtacgaagaaacgccaaga
catgcactcgaagaaaaagaaaagttggcataa
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integrated database retrieval system
