Fervidobacterium ngatamarikiense: JM64_09080
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Entry
JM64_09080 CDS
T10794
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fng Fervidobacterium ngatamarikiense
Brite
KEGG Orthology (KO) [BR:
fng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fng03016
]
JM64_09080
Enzymes [BR:
fng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JM64_09080
Transfer RNA biogenesis [BR:
fng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JM64_09080
Prokaryotic type
JM64_09080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
DUF5380
RNA_pol_Rpb2_4
DUF4467
Motif
Other DBs
NCBI-ProteinID:
ANE42054
UniProt:
A0A172T518
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All DBs
Position
complement(1934763..1935725)
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AA seq
320 aa
AA seq
DB search
MSTVSGILLVDKEKGPTSHDIVERVRKLLRIKQVGHAGTLDPFATGLLVVGVGKATKLLE
YLQHEDKVYKVKFKLGVITDTFDITGQIMEEHSDEVSKLSEGEVLGAIKSFIGTYRQVPP
AYSAKKYQGKKLYELAREGKIINLPPREVTIYDIWDVKINLPEVEFVTKVSSGTYVRSLC
MDIGYKLGCGATATELRRLSVGRFVVDDAIMIPEVKNLDIQVFESLRELIIKSLIPLEKV
LDFPRIVVKSQEKIYNGVQPKVEDIVEYENFKKDQIIQVFHNGKLIAIARAERNSEFMET
LKKHNRNERIATLIKVFKEE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacagtttcgggaatactacttgtggataaagaaaaaggaccaacgtctcacgat
attgttgagagagtgagaaaactgcttcgaataaaacaagttggacatgctggaacgctc
gacccgttcgcaacgggtcttcttgtggttggtgtgggaaaggcgacaaagttacttgag
tatcttcaacatgaagacaaagtctacaaggtaaagttcaaattgggtgtaatcaccgat
acctttgatataactggtcaaataatggaagaacattctgatgaggtttcgaaactttct
gaaggggaagtcttgggtgcgataaaatcttttataggaacatacagacaagttccacca
gcatactcggctaagaagtatcaaggcaaaaagctgtacgaacttgcacgagaagggaag
attataaatcttccaccgcgtgaagtaacaatatacgacatatgggacgtaaaaattaac
ttacctgaggttgaatttgttactaaggtctcttctggtacttatgtaagaagcctatgc
atggatataggttacaagttggggtgcggagcaactgcaacagagctcagaagattatca
gttggaagatttgtagtcgatgatgcgataatgataccggaagtaaagaatttagatatc
caagtttttgaaagtttacgggagctgattatcaaaagcttaattccgttggaaaaagtg
cttgatttcccaagaatagttgtgaaaagccaagagaaaatttataacggtgttcagcca
aaggttgaagacattgtagaatacgaaaatttcaaaaaggaccaaataatccaggttttt
cataacggaaaattaatagcaattgctcgtgctgagaggaattctgaattcatggagaca
ctcaaaaaacataacagaaacgaacgcatcgcaacactaataaaggtgtttaaggaggag
tag
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