Fervidobacterium ngatamarikiense: JM64_09105
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Entry
JM64_09105 CDS
T10794
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
fng Fervidobacterium ngatamarikiense
Brite
KEGG Orthology (KO) [BR:
fng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fng03019
]
JM64_09105
Messenger RNA biogenesis [BR:
fng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JM64_09105
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
tRNA_anti_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ANE42059
UniProt:
A0A172T4W3
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All DBs
Position
complement(1940461..1941444)
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AA seq
327 aa
AA seq
DB search
MNGFREALEKLRSPYVEELRNWIDKEIDGIYKIKSKKLQEAKDGKKFLLLTLEDRTGSVR
AVDWYNAEANDEKLQVGHVVNVRGKVVYFEERVQINVLNEQDAIKKLSENEYDIERFVRS
AENVEEMYKSVLRLIDTIRDEDYKTILQRFFVEDKNFVEMFKSSPAGMRIHHAYKGGLLE
HSLSVAKLVDSVCRIYNQLDRDLLVTGALLHDIGKVKEYAVNSNGIEVTTEGELVGHIVI
GIEMLAQKARGISYEKFLKLKHLIASHHGEFEWGSPVLPKTPEALVLHFIENMDSKINRV
MQIIDKEDKEKDWSEYDSNLSRRFFLK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggatttagagaggctctagaaaagcttaggtctccttacgtggaggaattgaga
aactggattgacaaagaaatcgatggaatatacaagattaagagcaaaaaactccaagaa
gcaaaagatggtaagaagtttcttctcttaacgttggaagacagaaccggaagcgtccga
gctgttgactggtacaacgccgaagctaacgacgaaaaactccaggttgggcacgttgtt
aatgtcagaggaaaagttgtgtatttcgaagagcgtgtacagataaatgttttaaacgag
caagacgctataaagaaactttctgaaaacgaatacgatattgagcgttttgttaggagc
gctgaaaatgttgaagaaatgtataaatcagttctaaggctgattgatacaatccgagac
gaagattacaagacaattcttcaaagattctttgtcgaagacaaaaattttgtggagatg
tttaaaagttcaccagctggaatgaggatacatcatgcgtacaaaggtggattgttggag
cattcgttgtctgttgcgaaacttgtggatagtgtctgtaggatttacaatcaacttgat
agagatttgctcgtaacaggtgcattgttacatgatattggaaaggttaaggaatatgca
gttaactccaatggtatagaagtgacaactgaaggcgaattggtaggacatatcgtcata
ggaatcgaaatgcttgctcaaaaggcaaggggaatatcctatgagaagttcttaaaatta
aaacaccttatcgcgtcccaccatggtgaatttgagtggggttcacctgtgttaccaaaa
actcccgaggcacttgtgcttcattttattgaaaatatggattccaagattaatcgtgta
atgcagataatagacaaggaggataaggaaaaagattggagcgaatacgactccaatctt
agcagaagattcttccttaaataa
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