Flavobacterium nackdongense: E1750_00580
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Entry
E1750_00580 CDS
T06713
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fnk
Flavobacterium nackdongense
Pathway
fnk03420
Nucleotide excision repair
fnk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E1750_00580
03430 Mismatch repair
E1750_00580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnk03400
]
E1750_00580
Enzymes [BR:
fnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E1750_00580
DNA repair and recombination proteins [BR:
fnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E1750_00580
MMR (mismatch excision repair)
Other MMR factors
E1750_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QBN17352
UniProt:
A0A4V1AGA4
LinkDB
All DBs
Position
136909..139239
Genome browser
AA seq
776 aa
AA seq
DB search
MQKYIDQLNEAQREPVLQKDGPMIIIAGAGSGKTRVLTIRIAYLMSQGVDAFSILALTFT
NKAAREMKNRISDIVGSNEAKNLWMGTFHSVFARILRSESDKLGYPSNFTIYDSQDSVRA
ISAIIKEMQLDRDIYKPKQVLSRISSYKNSLITVKAYFNNPELQEADAMSKKPRLGEIYQ
NYVERCFKAGAMDFDDLLLKTNELLTRFPEVLAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVKTFRLEQNYRSTKNIVEAANT
IIDKNKTKLDKIVWTANDFGPKIKVHRSLTDAEEGRFVASTIFEQKMQQQLTNGKFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVLNPKDEEALVRVINYP
HRGIGDTTVEKLTVAANHYKRSIFEVMQNIDKIDLKLNSGTKQKLQDFVMMIQSFQVINE
NQDAFYITDHVAKKTGLVQELKKDATPEGMAKIQNIEELLNGIKDFTEGQREIDGARGAL
SEFMEDVALATDLDKDTSDEDRVALMTIHLAKGLEFPHVFVVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLTDSEPSRFIEEIDGQYLEYLTPEENNY
RYKPMIDSDIFGDVDKSKLRLAKPTAGTPPSPPTAEGGARTDFNIRKLKPVSSNSGAANL
FDNKLLTGNIVMHERFGKGEVLNLEGVGADKKAEIKFEVGGIKKLLLRFAKLDVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatacatcgatcaactgaacgaagcgcaacgagagcccgtcctccaaaaagat
gggccaatgattattattgctggtgcaggctccggaaaaaccagagtgttgactatacgt
atcgcttatttaatgagtcaaggcgttgacgcttttagtattttggccttaacctttact
aataaggcggctcgcgaaatgaaaaaccgtatctcggatattgtcgggtccaatgaagcc
aaaaatctttggatggggacctttcactcggtttttgctcgaatattgcgatcagaatcg
gataaattagggtatccttcgaattttacgatctatgattctcaggattctgttcgtgcg
atttcggcgattatcaaggaaatgcaattggatcgggatatctacaagcccaagcaggtt
ttaagtcgtatttcttcttataaaaatagtttaataacagtaaaagcgtatttcaataat
cccgagttacaggaagccgatgcgatgagtaaaaaacctcgtttgggcgaaatttatcag
aattatgtcgagcgttgtttcaaagccggagcgatggactttgatgatttgttattaaaa
actaatgaattgctaacgcgcttccctgaggttttggctaagtatcagaaccgatttcgg
tatattttggtcgatgagtatcaagataccaatcactcacagtatttgattgttcgtgct
ttatcggataaattccaaaacatttgtgtagtcggcgatgatgctcaaagtatttatgct
tttcgcggtgccaatatcaataatattttgaattttcagaaagattatgaaggggtaaaa
acctttcgattggaacaaaattaccgttcgaccaaaaatattgtggaagctgctaatact
attatcgataagaataaaactaaactcgataaaattgtctggaccgccaatgattttgga
cctaaaatcaaagtgcatcgtagtctgaccgatgccgaggaaggtcgtttcgtggcaagc
actattttcgaacaaaagatgcaacagcaattgaccaatggtaaatttgctattttgtat
cgtacgaatgcccaatcacgtgcaatggaagatgccttgcgtaaaagagatattccgtat
cgaatttatggtggtttgtctttttatcaaagaaaagaaatcaaagatgttttgtgttat
ttgcgcttggttctgaatccaaaagatgaggaagcattggttcgtgttatcaattatcca
catcgcggaattggtgatactaccgtcgaaaagcttaccgtggcagccaatcattacaag
cgttccatatttgaagtgatgcaaaatattgacaaaatcgatttgaaactgaactcgggc
accaaacaaaaattgcaagattttgtgatgatgattcaaagttttcaagtgattaacgaa
aatcaagatgctttttatatcaccgaccacgtagctaaaaaaacgggattggttcaagaa
ttaaaaaaagatgctactcccgaaggaatggcaaaaattcaaaatatcgaagaattatta
aacggtatcaaagactttaccgaaggacaacgagagattgatggtgctcgtggtgcgtta
tcggaatttatggaagatgtagcgcttgcaaccgatttagataaagacactagcgatgaa
gatcgagtggctttgatgaccatacatctggccaaaggattggagtttccgcacgtattc
gtagtcggaatggaagaagatttattcccaagcgcaatgagtatgagcacgcgaagcgaa
ctcgaagaagaacgccgtttgttttatgtggctttaactagagcagaacatcaagcatat
ttgacgtatgctcaatcccgttaccgttggggaaaactcaccgacagtgaaccttcgcgt
tttattgaagaaatcgacggacaatatctcgaataccttacgcccgaagaaaataattac
cgctacaaaccaatgattgacagtgatatttttggggatgtcgataaatctaaattgcgt
ttggcaaaacctactgcaggtacgccaccaagccctccaaccgccgaagggggagctaga
accgattttaacattcgtaaactgaaaccagtttcgagtaattccggtgctgccaattta
tttgataataagctgttgacgggaaatattgtaatgcacgaacgttttggcaaaggcgaa
gtattaaacttggaaggcgttggcgcagacaaaaaagcagaaatcaaatttgaagtagga
ggaatcaagaaattgttgttgcgttttgctaagttggacgtgattgggtag
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