Flavobacterium nackdongense: E1750_09400
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Entry
E1750_09400 CDS
T06713
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fnk
Flavobacterium nackdongense
Pathway
fnk03030
DNA replication
fnk03430
Mismatch repair
fnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E1750_09400 (dnaE)
03430 Mismatch repair
E1750_09400 (dnaE)
03440 Homologous recombination
E1750_09400 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnk03032
]
E1750_09400 (dnaE)
03400 DNA repair and recombination proteins [BR:
fnk03400
]
E1750_09400 (dnaE)
Enzymes [BR:
fnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E1750_09400 (dnaE)
DNA replication proteins [BR:
fnk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E1750_09400 (dnaE)
DNA repair and recombination proteins [BR:
fnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E1750_09400 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QBN20618
UniProt:
A0A4P6YE37
LinkDB
All DBs
Position
complement(2202584..2207164)
Genome browser
AA seq
1526 aa
AA seq
DB search
MYLIFDTETTGLPKKYTAPISDTDNWPRCIQIAWQLHDDMGRVIEHQDFLVKPEGFNIPY
DAERIHGISTELAQAEGVPLAEVLEKFNIALSKAKFIVGQNLGFDVNIMGCEFYRLGVES
PMSSMPILDTCTEVTASLLKLPGGRGGKFKLPTLTELHQYLFNKPFAEAHNATADVEATT
RCFFELIRTEVFTKQELEVEQEYFEDFQLKNPREIQLIGLQHINLKEASDKIRQQLGGKQ
TATISKQELSDNRQSLIDTDFVHLHNHTQFSVLQSTISVAALVKAASQQKMPAVAMTDHA
NLMGAFHFVRDILYHNKAAETKNKEAVEKGEEPTEVPMKPIVGCEFFVCEDHKNKSVKDN
GYQIVLLAKNKKGYHNLAKMSSIAHTEGFYYVPRIDRKVIQQYKEDIIVLSGNLYGEIPS
KILNLGENQAEEALLWWKQEFGDDFYIEVMRHNQEDENRVNEALISLARKHGVKIVATNN
TFYIEKDNANAHDILLCVKEGEKQSTPIGRGRGYRFGLPNQEYYFKSGEEMKQLFNDLPE
AILNISEIVEKIEIYNLAREVLLPKFEIPAEFNVPEDAIDGGVRGENAYLKHLTFEGAKL
RYKEITPEIQERLDFELMTIANSGYPGYFLIVQDFIAEARKMGVSVGPGRGSAAGSVVAY
CLKITNIDPLMYNLLFERFLNPDRVSLPDIDIDFDDEGRSSVMDYVIRKYGQKQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADKIAKLIPGMMPSKWNLARFLNEKEELIKKTVRPEE
FEKIKELIGLANEDDLGGETIQQAKVLEGNLRNTGIHACGVIITPSDITDFVPVATAKDS
DLFVTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKYRSNIDLNPDEFPIDDAKTYE
LFQRGETVGIFQYESPGMQKYMKELKPTVFPDLIAMNALYRPGPIAYIPSFIKRKNGEEP
IEYDLDDCEELLKDTYGITVYQEQVMLLSQKLADFSKGDADVLRKAMGKKMIDVLAKMEP
KFISQAMAKGHAKDKLEKIWNDWKAFAEYAFNKSHSTCYAWIAYQTAYLKANYPAEYMAA
VLSNNMSDIKQVSFFMEECKRMGLKVLGPDVNESYYKFTVNDDYAVRFGMGAVKGVGSGA
VATIVENRKTTKYKSIFDLTKRIDLRAANKKALENLALAGGFDSFTGVTRAQYFHDDGDG
ITFYEKAIRYGAKFQENENSSQVSLFGESSDVQIAEPVVPPCEDWSTMEKLAKEKEVVGI
YISGHPLDDFKYEMKYFCNSRLESLKDLNQFVNKNLTFGGIISNVQHRIAKNGKGWAIFN
LEGYDESYEFKIFGEEYMKYRHYLIPNSFTYIKVLIKEGWPDKETGKKGEPKIQFSEFKM
LQDVFENFAKRVSVFLDVKDLNPELIAKMSAVFQANKGNNAVTFDVIELESARKPGEMLV
NVPKLEESTNTDLFEDEIPDEAVIFADDFSEEEEMDMGEPTASVESAAEETKVITRISMP
SRKLKVKISNELLFELEKLQLNFKLN
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatattcgataccgaaactacaggtttacctaaaaaatacaccgcacctatt
tctgatacagacaactggccaagatgtattcaaattgcttggcagttacacgatgatatg
ggtagagtcatcgaacatcaggactttttggtcaagcctgagggatttaatattccttat
gatgccgaaagaattcacggtatttcgactgaattggcgcaagccgaaggtgttccatta
gccgaagttttagaaaaattcaatattgctttatcgaaagccaaatttattgtgggtcaa
aatctaggttttgatgtcaatattatgggttgcgaattttatagattgggtgtcgaaagt
ccaatgagttcgatgccaattctggacacttgtaccgaggtgaccgcctccttattgaaa
ttgccaggaggtcgtggtggaaaattcaaactaccaacattaacagaattacaccaatat
cttttcaacaaaccttttgcagaagcacacaatgctactgccgatgtcgaggcaaccacg
cgttgctttttcgaattgattcgtaccgaagtttttaccaagcaggaactagaagttgaa
caggaatatttcgaggattttcaattaaaaaatcccagagaaattcaacttatcggattg
cagcacattaatctaaaggaagcatccgataaaattcgtcagcaattagggggtaagcaa
acggcaaccatttcgaaacaggaactttcggataacagacaaagtttaatcgacactgat
tttgtgcatttacacaaccatactcagttttcggttttgcaatcgaccattagtgttgct
gccttagtcaaagcggcttcacaacagaaaatgcctgcagtggcaatgaccgatcacgcc
aatttgatgggggcttttcactttgttcgtgatattttatatcataataaagcggccgaa
actaaaaataaggaagccgtagaaaaaggcgaagaaccaaccgaagttccaatgaagcct
attgtgggttgtgaattttttgtttgcgaagaccataaaaataagtccgtcaaagataat
ggctatcaaattgtgctcttggcaaagaataaaaaaggctatcataatttggctaaaatg
tcctccattgcgcacaccgaaggtttttactatgtgcccagaatagaccgaaaagtcatt
caacaatacaaagaagacatcattgttctgtcgggaaatctctatggtgaaattcctagt
aagattttgaatttgggcgaaaaccaagccgaagaagccttgctgtggtggaaacaagaa
tttggcgacgatttttatattgaagtaatgcgtcacaatcaggaagacgaaaatcgtgta
aatgaagccttaatttcattggcaagaaagcacggggtcaaaattgtggcaaccaataat
actttttatatagagaaagataatgccaatgcgcacgatattttattgtgtgtaaaagaa
ggcgaaaaacaatctacgccaataggtcgtggacgaggctatcgttttggcttgcccaat
caggaatattatttcaagtcaggcgaggaaatgaagcaacttttcaatgatttgccggaa
gcgattttgaatatttccgaaattgtcgaaaaaattgaaatttacaacttggctcgtgaa
gttttgcttccaaagtttgagattccagcagaatttaatgttcccgaagatgccatcgat
ggtggagttcgaggcgaaaatgcctatttgaaacaccttacttttgaaggtgcaaagcta
aggtacaaggaaattactccagaaattcaggaacgattggatttcgaattgatgactatt
gccaactcaggttatccgggttatttcttgattgtgcaagactttatcgccgaggctcga
aaaatgggggtttctgtaggtcctggtcggggttctgccgcaggttcggtggtggcctat
tgtttgaaaatcaccaatatcgacccgttgatgtacaatctgcttttcgaaagattcttg
aatccggacagggtttcacttcccgatattgatatcgattttgatgacgaaggacgtagc
agcgtaatggattatgtgattcgaaaatacggtcaaaaacaagtagcgcagattatcact
tacggtaaaatggccaccaaatcggcaattcgcgatacggctcgtgtgttggatttgcct
ttattcgaagcagataaaatagccaaattaattccggggatgatgccgtccaaatggaat
ttagctcgttttttgaacgaaaaagaagagttaatcaagaagacagttcggcctgaggaa
tttgaaaaaataaaggaattaattggtctggccaatgaagacgatttaggtggagaaacc
attcagcaagccaaagttttagagggaaaccttagaaatactggaattcacgcttgtggg
gtgattattacgcctagtgatataaccgattttgtgccagtggcaaccgccaaagattcg
gatttatttgtcacacaatttgataactcggtggtagaaagtgcgggtttgttgaagatg
gacttcttgggtctgaaaaccctaacattgattaaagacactgtaaaactggtcaaatac
agaagcaatattgatctgaatccagacgaatttccgattgatgatgccaaaacctacgag
ctttttcaacggggtgaaacggtggggattttccaatatgaaagcccaggaatgcaaaaa
tatatgaaggaattgaagcctacggtttttcctgatttgattgcgatgaatgcgctgtat
cgcccgggaccaattgcgtatattccgagttttattaaacggaaaaatggcgaagagcct
atagaatatgacttggacgattgcgaagaattattaaaagatacctatggaatcaccgtt
taccaagaacaggtaatgcttttgtcccaaaaattggcagatttctccaaaggtgatgct
gacgttttgcgtaaagcaatggggaaaaagatgattgatgtgttggcgaaaatggaaccc
aaattcatctcgcaagcgatggcaaaaggacacgccaaagacaaattagaaaaaatttgg
aacgactggaaagcctttgcggaatatgcgttcaacaaatcgcattctacttgttatgct
tggattgcctaccaaacggcttatttgaaagcgaattatccagccgaatatatggcagca
gttttgtcgaataatatgagtgatatcaagcaagtctccttttttatggaggaatgtaag
cgaatgggattgaaggttttggggcctgatgtaaacgaatcctattataaattcacagta
aatgacgattatgccgttcgtttcgggatgggagcggtaaaaggagtgggttctggagcc
gtggcgaccattgtcgagaacagaaaaaccacaaaatacaaatcgatttttgatttgacc
aaacgtatcgatttgcgtgcggcgaataaaaaagcattagaaaatctagctttggctggt
ggttttgattcctttaccggggtgactcgagcacaatacttccacgatgacggcgatgga
attacgttttatgaaaaggccattcgctatggagcgaagtttcaggaaaacgaaaattca
tcgcaggtgagtttgtttggcgaaagcagcgatgtgcaaattgccgaacctgttgtgcct
ccatgtgaagattggagtaccatggaaaaactcgccaaagaaaaagaagtggtcgggatt
tatatttcaggacatcccttggatgatttcaaatatgagatgaaatatttttgcaattct
aggctggagtcgctcaaagatttgaaccaatttgtgaacaagaatttaacttttggcgga
ataattagtaatgttcaacaccgaattgccaagaatggcaagggctgggctatttttaat
ctcgaagggtacgacgaaagttacgagttcaaaatttttggagaagagtatatgaaatac
cgtcattatttaattcccaatagttttacctatataaaagtattaattaaagaaggttgg
ccagataaagaaactggaaaaaaaggggagcctaagattcagttttctgaatttaaaatg
ctgcaggatgtgttcgaaaattttgccaaaagagtcagtgtttttttggatgtcaaagac
ttgaatccagaattgatagctaaaatgagtgccgtttttcaggccaataaggggaataat
gcagtcacatttgatgttatagagctcgaatccgcaaggaaaccgggcgaaatgttggtc
aatgttccaaaattagaagaaagcacaaacacagacttgttcgaagatgaaattccggat
gaggccgtaatttttgcagacgatttttctgaagaagaggaaatggatatgggcgagcct
actgcttcggttgaatcggcagcagaggaaaccaaagtgattactcggatttcgatgccc
agccgcaaattgaaagtaaagatttcgaatgaacttttattcgaattagagaagttgcaa
cttaattttaagttgaattaa
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integrated database retrieval system
