Flavobacterium nackdongense: E1750_12220
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Entry
E1750_12220 CDS
T06713
Name
(GenBank) T9SS type A sorting domain-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fnk
Flavobacterium nackdongense
Pathway
fnk00040
Pentose and glucuronate interconversions
fnk01100
Metabolic pathways
fnk01120
Microbial metabolism in diverse environments
fnk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fnk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
E1750_12220
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E1750_12220
Enzymes [BR:
fnk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
E1750_12220
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Motif
Pfam:
Pectate_lyase_4
Por_Secre_tail
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QBN19530
UniProt:
A0A4P6YG53
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Position
2851694..2853061
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AA seq
455 aa
AA seq
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MKKSVFLFISLFIISHAFGQNYYMPTPEGFGEAATGGGTPTVSNTVTVTTYTQFKNALTS
TAASTAVILVSGTIDCVYTSVLLTNKTIVGLPGARLRNNQITIGNSTTSAQNSGILYIKA
GSNNVIVRNLIFEGPGAYDVDGRDNLTNEGRNIWVDHCEFQDGMDGNFDNKGECDNTTIS
WCKFTYLKPAIAGGSGGSADHRFSNLVGSAIDDLPSSDGRYSVTFKNCYWAEGCKARMPR
ARNAELHVLNCYFKTNVSGASAVGLGAGNSGTNCYVENCNFEQIATISSPVTEGTGTTSV
KFDGCTKGTTPTPVTGLDKLTATKPTYTYTVFPVDNVASYVSNATCGAGATLNVNATGEI
SSACPNLGLGYQEVQLGKLYPTVVDSTLHINLSDNVAGHAMITIFSSLGAKLMSYSKAST
PAEKLSLNVSNLASGLYLCHLSIGANSTSWKFIKK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcagtttttctttttatcagtttgtttataattagccatgcttttggtcaa
aattattatatgcccactcccgaggggtttggcgaggctgcaacgggtggaggaacgcct
acggtttcgaataccgtaaccgtgacgacttatactcaattcaaaaatgcgctaacttct
acagcggcctcaacagcggttattttggtttcgggaacgattgattgtgtgtatacgagc
gtattattaaccaataaaaccattgtcggattgcctggtgcaaggcttagaaacaatcaa
attaccattggcaactcgactacttcggcgcagaattcaggtattctgtacataaaagcg
ggatcaaataatgtgattgtgcgaaatcttatttttgaaggtcctggcgcttacgatgtc
gatggtcgggacaatctaacgaatgaaggtagaaatatttgggtggatcactgcgaattt
caagacggaatggacggtaattttgataataaaggcgaatgcgacaatactactatttca
tggtgcaaattcacttatttgaaacccgcaattgcaggcggttccggaggttctgccgat
catcgtttttccaatttagttggatcagccatagatgatttaccatcttctgatggcaga
tacagtgtaacctttaaaaactgttattgggccgaaggctgtaaagcgaggatgccaaga
gccagaaatgccgaattgcatgtgctaaattgttatttcaaaaccaatgtttcaggagct
tcggcagtgggattgggagcgggaaatagcggtacgaattgctatgtcgagaattgtaat
tttgagcaaattgccactatttcaagtcctgttaccgaaggtacgggcactacttcggta
aaatttgatggatgtaccaaaggaacaacaccaacccctgtaacgggattggacaaactt
acggcaacaaaaccaacctatacctatactgtatttcctgtggacaatgttgcttcttat
gtatccaatgccacttgtggtgccggtgctacattaaatgttaatgcaacgggtgagatt
tcctcggcctgtccaaatttaggattgggatatcaagaagtacaattagggaaattgtat
ccaacagttgtagacagtacattacatattaatctgtccgataatgtggcaggtcatgct
atgataaccattttttcgtctttgggagcaaaactgatgagttattccaaagcaagtaca
ccagccgaaaaactatcactgaatgtttcaaatctcgccagtggactgtatttgtgccac
ctttccattggtgctaatagtacttcttggaagtttataaaaaaatag
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