Flavobacterium nackdongense: E1750_12345
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Entry
E1750_12345 CDS
T06713
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fnk
Flavobacterium nackdongense
Brite
KEGG Orthology (KO) [BR:
fnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fnk03016
]
E1750_12345 (truB)
Enzymes [BR:
fnk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E1750_12345 (truB)
Transfer RNA biogenesis [BR:
fnk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E1750_12345 (truB)
Prokaryotic type
E1750_12345 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QBN19554
UniProt:
A0A4P6YF87
LinkDB
All DBs
Position
complement(2895233..2895925)
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AA seq
230 aa
AA seq
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MSTEEYLNGQIILIDKPLHWTSFQAVNKMKYALINKKGLPKKFKIGHAGTLDPLASGLLL
VCTGKFTKRISELQGQAKEYTGTFYIGATTPSYDLETEINETFDTSHIDEALIQNTVKHF
LGEIDQKPPIFSAIKKDGIRLYEHARAGDSVEIASRKTSIHEFEITRIALPEIDFRVVCS
KGTYIRSLAYDFGKKMNSGSHLTALRRTKIGEFNVDNAIDITLFEQSLSM
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgaagagtacttaaatggacaaatcatccttattgacaagcccttgcattgg
acttcgtttcaagcggtcaataaaatgaaatatgctttaattaacaaaaaagggcttccg
aaaaaattcaaaattggtcatgcaggaactttagatccattagcaagtggtcttttacta
gtttgcacaggcaagttcaccaaaagaatttcagaacttcagggtcaagccaaagaatat
actggcactttctacattggtgcgacaactccgtcttatgatttagaaaccgaaatcaat
gaaactttcgatacttcacatatcgatgaagccttgattcaaaatacagtgaaacacttt
ttgggggaaatcgaccaaaaaccacctattttttcggccataaaaaaagacggaatccgt
ctttatgaacacgctcgtgctggagatagtgtggaaatagccagccgaaaaaccagcatt
cacgaattcgaaatcactcgcattgcacttcctgaaatcgattttagagtagtgtgcagc
aaaggcacctacattcgttctttagcttatgattttggcaaaaaaatgaactccggctca
cacctcacggcgttgcggcgaacaaaaatcggagaatttaatgttgataatgcaattgac
atcactttattcgaacaaagtttgtctatgtaa
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