Flavobacterium nackdongense: E1750_13200
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Entry
E1750_13200 CDS
T06713
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fnk
Flavobacterium nackdongense
Pathway
fnk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1750_13200 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnk03019
]
E1750_13200 (groL)
03110 Chaperones and folding catalysts [BR:
fnk03110
]
E1750_13200 (groL)
03029 Mitochondrial biogenesis [BR:
fnk03029
]
E1750_13200 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fnk04147
]
E1750_13200 (groL)
Enzymes [BR:
fnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E1750_13200 (groL)
Messenger RNA biogenesis [BR:
fnk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E1750_13200 (groL)
Chaperones and folding catalysts [BR:
fnk03110
]
Heat shock proteins
HSP60 / Chaperonin
E1750_13200 (groL)
Mitochondrial biogenesis [BR:
fnk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E1750_13200 (groL)
Exosome [BR:
fnk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E1750_13200 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E1750_13200 (groL)
Exosomal proteins of breast cancer cells
E1750_13200 (groL)
Exosomal proteins of colorectal cancer cells
E1750_13200 (groL)
Exosomal proteins of bladder cancer cells
E1750_13200 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
NNH2
Motif
Other DBs
NCBI-ProteinID:
QBN19719
UniProt:
A0A4P6Y9P1
LinkDB
All DBs
Position
complement(3088449..3090077)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVTVAKEIE
LKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLSKQAKVVGSDSEKIKQIAAISANNDEVIGELIANAFAKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNAEKMEAELDSPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYTLENTTIEMLGTAKRVTIDKDNTTIVSGAGEAEMIKNRVNQIKGQMETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKNALAELKADNADEATGIKIISRAVEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEENPAAHAHGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgtggagttgat
gctttggcaaacgctgtaaaagtaacccttggacccaaaggtcgtaatgtaattattgga
aaatcttttggtggaccaaccgttactaaagatggtgttactgttgcaaaagaaatcgaa
ttgaaagacccattagaaaatatgggcgctcaaatggtcaaagaagtagcttctaaaacc
aatgatttagcaggagacggaactacaaccgccaccgtattggcacaagccatcgtaaaa
gaaggtttgaaaaacgtagccgctggtgcaaacccaatggatttgaaaagaggaatcgac
aaagcggttgaggctatcgttgctgatttatctaaacaagccaaagtagtaggcagcgat
tcggaaaaaatcaaacaaattgcagcaatttcggccaataacgacgaagtaattggcgaa
ttgattgctaacgctttcgcaaaagtaggaaaagaaggtgtaatcactgtggaagaagcc
aaaggaactgacacttatgtagatgttgtggaaggtatgcaatttgacagaggttatctt
tcgccctattttgtgaccaatgccgagaaaatggaagcggaattagacagcccatacatt
ttattgtacgacaaaaaagtatcttcattaaaagaattattacctgttcttgaaccggta
gcacaatcaggaaaacccttattgattatcgctgaagacgttgatggagaagctttatca
accttggttgtcaataaattgcgtggtgccttgaaaatcgccgctgtaaaagcgcctggt
tttggcgacagaagaaaagcaatgttggaagatatcgctatcttaactggtggaactgta
atttctgaagaaagaggttatactttagaaaatactaccatcgaaatgttgggaacggct
aaaagagtcactatagacaaagacaacactacaatcgttagtggcgctggtgaggccgaa
atgattaaaaatcgtgtgaaccaaatcaaaggtcaaatggaaactactacctctgattat
gacaaagaaaaattgcaagaacgtttggctaaactagctggcggtgtggctgttctttat
gtgggtgctgcttctgaagtggaaatgaaagagaaaaaagatagagttgatgatgctctt
cacgctactcgtgccgcagttgaagaaggcatcgttgctggtggtggtgttgctttattg
agagctaaaaacgcccttgctgaattgaaagcagacaatgccgatgaagctacaggaatc
aaaattatttctcgcgctgttgaggctccattgagaactattgtagaaaacgctggatta
gaaggttctgttgttgttgcaaaagtagctgaaggttcaggagattttggttacaatgcc
aaaacagacgaatatgtagatatgctaaaagctggaatcattgatcctaaaaaagtaact
cgtgtggctttagaaaacgctgcttctgtagcaggaatgatcttaactaccgaatgtgct
ttgattgatattaaagaagaaaatcctgcagcacacgcccacggtggcggaatgcccgga
atgatgtaa
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