KEGG   Flavobacterium nackdongense: E1750_14860
Entry
E1750_14860       CDS       T06713                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
fnk  Flavobacterium nackdongense
Brite
KEGG Orthology (KO) [BR:fnk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fnk03032]
    E1750_14860
   03036 Chromosome and associated proteins [BR:fnk03036]
    E1750_14860
   03400 DNA repair and recombination proteins [BR:fnk03400]
    E1750_14860
DNA replication proteins [BR:fnk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    E1750_14860
Chromosome and associated proteins [BR:fnk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    E1750_14860
DNA repair and recombination proteins [BR:fnk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      E1750_14860
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: QBN20022
UniProt: A0A4V1AH21
LinkDB
Position
complement(3455574..3455846)
AA seq 90 aa
MNKSELIDAIAADAGITKAAAKLALESFLGNVGSTLKKGGRVSLVGFGSWSVSSRAARDG
RNPQTGKTIKIAAKNVVKFKAGAELEGAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaatcagaattaatcgacgctatcgctgctgatgcaggaattacaaaagctgct
gctaaactagctttagaatcttttttaggaaacgtaggtagtactttgaaaaaaggtgga
agagtatctttagtaggtttcggatcttggtcagtttcttcaagagctgcaagagatggt
agaaatcctcaaacaggaaaaacaataaaaattgctgctaaaaatgtagtgaaatttaaa
gctggagctgaattagaaggcgctgtaaactaa

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