Francisella orientalis LADL 07-285A: M973_02910
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Entry
M973_02910 CDS
T02952
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fnl
Francisella orientalis LADL 07-285A
Pathway
fnl03030
DNA replication
fnl03430
Mismatch repair
fnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M973_02910
03430 Mismatch repair
M973_02910
03440 Homologous recombination
M973_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnl03032
]
M973_02910
03400 DNA repair and recombination proteins [BR:
fnl03400
]
M973_02910
Enzymes [BR:
fnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M973_02910
DNA replication proteins [BR:
fnl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M973_02910
DNA repair and recombination proteins [BR:
fnl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M973_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Glyco_hydro_65m
fn3_2
Motif
Other DBs
NCBI-ProteinID:
AHB98094
LinkDB
All DBs
Position
503447..506926
Genome browser
AA seq
1159 aa
AA seq
DB search
MFSHLRVHTGYSVVDSTVRLGDLFARAKDKSIVAVALTDVCNLFAAVKFYKQALSNGIKP
IFGVELKIDTEFGVCDLVLLAENNQGYQNIVNLVSKAYQEADRFGSIPLIPKDWLKDINL
ANIICLNGGQNGELGKAVLAKDNIKAEEIISENIAIFGRDSYIIEIHKLEYENEGLYNEK
ALEFASEHNLIAVATNLTVFLESDDYDIHEIRACINEKTTILDESRKSKFTREQYLKSAD
EMYQTFSELPVLLENTLAIAKRCNVTFYLGKPCLPTVDIPDGLTEREYFSKLCYQGLDKR
LAKIIENRPVDKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPEMPGTTFKKILHEGEPL
YDEMQADEEVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNTIASINAKRPTNQSSLDISDIPLDDEKTFKLLQA
GKTIGIFQLESQGMQQIVKDLGTSNFEEIIALVALYRPGPIENIPTFVDRKHGRKQTIYL
HPLLEEVLRETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDAKNMGITVLAPNVNKSVYDCIAALKGTILLGLGAIKGLGGEAIKS
ILNEREAGGKCSSIFDLTRRVDLRKVNKKALEALCCAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMAAAGQNDLFGFTEQESDTDTELERECIVEEWNLRELLINEKKALGMYFSGHII
DGESHWRNHVSFSDLEKIQKPSMDGNSVRIIASMITPPARRKTKTGRILYIINIDDEFDR
ADCLIGEDVFAAVKDNIQVDDVVVVEGKVSRDNQRECNKLSVDKVQPISQYIDENFSKVE
LNLRSQNVNSTNLKKVLDNLKKNIATTDIQRENVLEIKVSLDDVDAKFEYFRKPFSVYEF
VNDISRLIAEGSTVSLSGV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcatcttcgtgtccatacaggatattctgttgttgatagtacagttcgttta
ggagatctttttgctcgagcaaaagataaaagtattgtcgcagtagcattaaccgatgtg
tgtaatttatttgctgcggttaaattttataagcaagctttatcaaatgggattaagcct
atctttggcgtagagctaaagattgatacagaatttggcgtatgtgatttagtactatta
gcagaaaataatcaaggttatcaaaatatagttaatctagtttcaaaagcatatcaagag
gctgataggtttggttcaataccattaatccccaaagactggctaaaagatataaatttg
gcaaatatcatctgtctaaatggtggtcagaatggtgagctaggcaaagctgttttagct
aaagataatatcaaggctgaagaaattattagtgaaaatatcgcaatttttggtagagat
agttatattattgaaattcacaaacttgagtatgaaaatgagggcttatacaacgagaaa
gcactcgaatttgcaagtgagcataatctcatagcagtagcgacaaacttgacggtattt
ttggagtcagatgattatgatattcatgaaatcagagcttgtatcaatgaaaaaacaacg
atccttgatgagtcgcgcaaatctaaatttacaagagagcagtatctaaaatcagctgat
gagatgtatcaaactttctcagagctaccagtgttgttagagaatactttagcaatagca
aaaaggtgtaatgtaacattttatctaggtaaaccatgtttgccaactgttgatattcca
gatggtttgacggagagagagtacttttcaaagctatgctatcaaggtttagataaacgt
ttagcaaaaattatagaaaacagaccagttgataaacatgagcatattataaaagtttac
aaagatagactgcaacgcgagatcgatattatctgtgatatgggatttcctggttatttc
ttgatagttgaagatttcattagatggtcaaaagagaatgatatcccagtaggtccaggg
cgtggttctggtgctggttcattagtagcttattcactgcttattactgatattgatcct
ttaccgtatgggttgctttttgagagatttctaaatcctgaaagggtatcgatgccagat
tttgatattgatttctgtattcaaggtcgagatagagttatcaaatatgtagagcagaaa
tatggtaaacaaagcgttgggcaaattattacttacggtactatggctgccaaaggtgtg
gtacgagatgtagtgcgtgtaatgggacagagttttggttttggagataggattgctaag
ctaataccagaaatgccgggtactacatttaagaagattcttcatgaaggtgagcctcta
tacgatgaaatgcaggcagatgaagaagttgctgagattgttgaaaaagctcaaaaatta
gaaggtctaccacgaagtttaggtaagcatgcggcgggtattgtgatatccccgactgtg
atatcagattttgctcctgtatattgtgaagataaaggtggagatatagttacccaattt
gataagggcgatgttgaagatgttggtcttgtgaagtttgacttcttgggattgaaaaac
ttaacaatcatcaaaaatactattgcaagtatcaatgctaaaagaccaactaatcaatca
tctctagatatctctgatattcctcttgatgatgaaaagacatttaaactactacaggct
ggtaaaactatcggtatattccagctagagtcacaagggatgcaacagattgtcaaagat
cttggcacttcaaattttgaggagattatcgccctagtagccctatatcgtcctggtccg
atagagaatattccaacattcgtagatcgtaaacatggtagaaagcaaactatctattta
catccattactagaagaagtgcttagagaaacttatggtataccagtttatcaagagcag
gtaatgcaaatggcgcagaagctagctggttatactttaggtggagcagatttattgcgt
cgcgcaatgggtaagaaaaagccagaagagatggagcaacagcgtaaaatttttaaagaa
ggtgctgctaaatatcacaatattgaagctggcctcgctgatgagatatttgaccaaatg
gaagcctttgctggttatggtttcaacaaatctcatgctgcggcttatgcgttgattgca
taccaaacagcttggctgaaggctcattaccctgatgagtatatggcagctcttatgtcg
ggtgatatgggtaatacagatcagttggttaaatttattttagatgctaagaatatgggt
atcacggttttagcaccaaatgtaaataagagtgtctatgactgtattgcagctttaaaa
gggacgattttattgggtctaggagctatcaaaggtctaggtggtgaagcaatcaaaagt
atacttaatgagcgtgaggcaggtggtaagtgtagttctatttttgacttaactcgtaga
gtagatttgcgtaaggttaataaaaaagcactcgaagcattatgttgtgcaggagctatc
aaggatatatctaaaaatagagcaacagctttcaattctattgaaaaagctattaaaaat
gcgggttatgtgaatgaaatggcagcagctgggcaaaatgatttattcggttttacagaa
caagagagtgatactgatacagagcttgaaagagagtgtattgtagaagagtggaatctt
agagagcttttgattaatgagaaaaaagcattaggaatgtatttctcagggcatattatt
gatggtgaaagtcattggcgtaatcatgttagctttagtgatcttgagaaaatccaaaaa
ccaagcatggatggtaattctgtaagaattattgcaagtatgataacaccaccagctaga
cgaaaaactaagactggtagaattctatatattattaatattgatgatgagtttgataga
gcagattgtttgattggtgaagatgtatttgctgcagttaaagataatattcaggttgat
gatgtggttgtagtagagggtaaagttagccgcgataatcaaagagagtgcaataagcta
agtgttgataaggtacaaccaatatcacaatatattgatgagaattttagtaaagttgag
ctgaatttaagaagtcaaaatgtaaattcaactaacctaaaaaaagtattagataaccta
aagaaaaatatcgctactactgatattcaaagagaaaatgtcttagagataaaagtatct
ctagatgatgttgatgctaagtttgaatattttcgaaagccattctcggtgtatgagttt
gttaatgatattagtaggttaatagctgagggaagtacggttagtttgagtggggtttaa
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