Francisella noatunensis subsp. noatunensis: FSC774_01620
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Entry
FSC774_01620 CDS
T07065
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Pathway
fnn03410
Base excision repair
fnn03430
Mismatch repair
fnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSC774_01620 (recJ)
03430 Mismatch repair
FSC774_01620 (recJ)
03440 Homologous recombination
FSC774_01620 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnn03400
]
FSC774_01620 (recJ)
DNA repair and recombination proteins [BR:
fnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FSC774_01620 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FSC774_01620 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FSC774_01620 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7222
Motif
Other DBs
NCBI-ProteinID:
QOG54423
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Position
complement(322944..324686)
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AA seq
580 aa
AA seq
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MLIRQKQANQDILSNLLSKGYDLFLARIISSRVSNFENIDLILKGSIKDLSSPFLFKDID
KAVDRLFQALQNYEIIGLETDHDCDGQTSHAILYEALTKIFNYPKEKIRSYIGHRMQEGY
GLSESLMNRILTDSIRPNLIITADNGSTDEPRIAVLKQNGIDTIVTDHHGIPPEGAPKSA
IAVLNPTQHDCDYPDKAIAGCMVAWLFMAALRRKYLQNSKSLSKSYGLSNLLDFVAIGTV
ADCVSMANSHNNRIVTKLGIEQLKNNDRLCWDFLNKDKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDERKIEETYENLTKQNSQRKEIQKKLTHEAITKAHQLDNNNNSLCILLN
DGHSGIHGITASRVKEMFGKPVIIFSETQNDSNIISGSARSVDSINIKTILDSIARKSPT
LMIKYGGHKGAAGLTINKSDFDTFYDLFESEIINFVKNNSISLEPILEYDFKLEENDFKL
QTLEKIESLEPFGREFEKPLFYNSFTIENLRLVGKDKNHAQLVLRYKNIPSIKAIWFNAS
ENKIIEQIAIGDTIKACYELQKEEFLGQINLSLNIKLIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttaataagacaaaaacaagctaatcaagatatattgtctaacctattatcaaaaggt
tatgacttatttttagcacggattatctcttctagagtaagtaattttgagaacattgat
cttatactaaaaggctctataaaagatctatcgtccccctttctcttcaaagatatcgat
aaagccgtagatagactttttcaagcgttacaaaattatgaaatcattggattagaaacc
gaccatgactgtgatggccaaacatcgcatgcaattttatatgaagcactgacaaagata
ttcaattaccctaaagaaaagattcgttcatatataggtcacaggatgcaggaaggatat
ggtctatcagagtctctgatgaatagaatattaacagatagtattagaccaaatcttatc
ataacagctgataatggttcaacagatgagcctaggattgctgttcttaaacaaaatgga
attgatactatcgtaactgatcaccatggtattcctcctgagggagcgcctaaaagtgct
atcgccgtactaaacccaacccaacatgattgtgattatcctgacaaagctatagctggc
tgtatggttgcttggctttttatggcggctcttcgtagaaaatatctacaaaatagtaaa
tcattatctaagtcttacggattaagtaatttacttgattttgttgccattggtacagtt
gcagactgtgttagcatggcaaatagtcacaataaccgcattgttacaaaacttggtata
gagcaactaaaaaacaatgatcgtctatgttgggacttcttaaataaagataaattatca
agtgagtatattagttttagtatagctcctttgctaaatagtgacggaagagtttctgat
gcactagggtctgttagctttttacttgagaatgatgaacgcaaaattgaagaaacgtac
gaaaacctaactaaacaaaatagccaacgtaaagaaattcaaaaaaagcttactcatgaa
gcaataaccaaagcacatcaattagacaataataacaactcattatgtatactacttaat
gatggtcattctggaattcatggtattacagcaagtagagtcaaagaaatgtttggtaaa
cctgtgattattttttctgaaacacaaaatgattctaacataatatcaggctctgctaga
agtgtagatagtattaatattaaaacaatacttgattctatagcacgtaaatcgcctact
ttgatgataaagtatggtggtcataaaggtgctgctggcttaacaattaacaaatctgat
ttcgatactttttatgatttatttgaaagtgaaattattaatttcgttaaaaacaatagt
atatctttagagcctattttagagtatgattttaaacttgaagagaatgatttcaaacta
caaaccctagaaaagatagaatctcttgaaccatttggcagagaatttgaaaaacctcta
ttttacaatagcttcactatagaaaatctacgtttagttggtaaagataaaaatcatgct
caactagttttacgctataaaaatattccttcaattaaagctatatggtttaatgcttca
gaaaataaaataattgaacaaatagctattggcgatactataaaagcctgttatgaacta
caaaaagaagagttcctcgggcaaataaacttatctctcaatattaaacttatcgaaaaa
tga
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