Francisella noatunensis subsp. noatunensis: FSC774_02940
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Entry
FSC774_02940 CDS
T07065
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fnn03009
]
FSC774_02940 (rlmD)
Enzymes [BR:
fnn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FSC774_02940 (rlmD)
Ribosome biogenesis [BR:
fnn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FSC774_02940 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
RrnaAD
Methyltransf_25
MTS
TRAM
TRM5-TYW2_MTfase
Methyltransf_11
PCMT
Methyltransf_15
Methyltransf_4
Ubie_methyltran
DOT1
Cons_hypoth95
N6_N4_Mtase
Methyltr_RsmB-F
Methyltransf_12
TFIIE_beta
Motif
Other DBs
NCBI-ProteinID:
QOG54595
LinkDB
All DBs
Position
582272..583621
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AA seq
449 aa
AA seq
DB search
MGRSRRHKKPQEGIFEAEIIALSHDGRGIAKVNGKTTFIPFTLPREVVKFEYTFTKAKFD
EAKVVEYIKKSSNRVNPPCEYFEICGGCSLQHMSTDAQIEHKQQTLLNQLKYIGQGVEPL
SILESLRTAKTEGYRNKARLGVRHVNKKGKILVGFRERNGRFLADIDKCIVLNPLIGEKL
TEIASFIEKLSIYQHIAQLEIAIDDIRPALIVRHLEPFINEDLEKLKAFGKQNNYWIYLQ
SKGPDTIFRLYPQEDIEPKKLSYQPVAEINIGFEPNDFTQVNNDINKKMIKRAIDLLEIS
ENDSIIDLFCGLGNFTLPISQYAKTVIGVEGEQTMVSRAKETAANNNISNVKFYAANLFE
SFEDKEWFNNFEYNKMLLDPPRAGAQEVCSNIEKFDVERIVYVSCDTATLARDAGILVND
KGYKLVSAGVMDMFPHTMHVESIAVFEKV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatctagaagacataagaaacctcaagagggtatttttgaagctgaaattata
gcacttagtcatgatggtagaggaatagcaaaagttaatggtaaaacgacttttattcca
tttacattacctagagaagtagtcaaatttgagtatacatttacaaaggctaagtttgat
gaagcaaaagtagttgaatatattaaaaaatcatctaatagagttaatcctccttgtgaa
tattttgaaatttgtggaggttgtagcttacaacatatgtctacagatgcacagattgag
cataagcaacaaaccttactgaatcaacttaagtatattggccaaggagtggaacctctg
agtattctagaatcattacgtacggctaaaaccgaaggatatcgtaataaagcacgttta
ggtgttagacatgttaacaaaaaaggtaaaattctagtaggattcagagagcgtaatggt
agatttttagctgatatagataaatgtatagtattaaatcctttaataggagaaaaacta
acagaaatagcttcctttatagaaaaactctctatatatcagcatatagcacaattagag
attgcaattgatgatataagaccagcacttattgtgcgccatcttgagccgtttataaat
gaagatcttgaaaagctaaaagcttttggtaagcagaataattattggatatacctacaa
tcaaaaggccctgatactatctttagactgtatccacaagaagatattgaacctaaaaag
ttaagttatcagccagttgctgagataaatattggttttgaacctaatgattttactcaa
gttaataatgatattaataaaaagatgattaaaagagctattgatcttttagaaatatca
gaaaatgattctattatcgatttgttttgtggtttaggaaactttacgttgccaatttct
cagtatgcaaaaactgtaattggtgtagagggagagcagacaatggttagtagagctaaa
gaaacagcggctaataataatatcagcaatgttaagttttatgcggccaacctttttgaa
agctttgaagataaagaatggtttaataattttgaatataacaaaatgctattggatccg
ccgagagctggggctcaagaagtgtgtagtaatatcgaaaagtttgatgttgagcgtatt
gtttatgtatcatgcgatactgctaccttggcaagagacgctggcattttagtaaatgat
aaaggctataaactagttagtgcaggtgttatggatatgttccctcatacaatgcatgtt
gagtcaatagctgtttttgaaaaggtttaa
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