Francisella noatunensis subsp. noatunensis: FSC774_04370
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Entry
FSC774_04370 CDS
T07065
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fnn
Francisella noatunensis subsp. noatunensis
Pathway
fnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSC774_04370 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fnn03021
]
FSC774_04370 (rho)
03019 Messenger RNA biogenesis [BR:
fnn03019
]
FSC774_04370 (rho)
Transcription machinery [BR:
fnn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FSC774_04370 (rho)
Messenger RNA biogenesis [BR:
fnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FSC774_04370 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA
ResIII
S1CSD-TOTE-2
AAA_22
DUF3086
Motif
Other DBs
NCBI-ProteinID:
QOG54790
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All DBs
Position
860507..861769
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AA seq
420 aa
AA seq
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MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRDNEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSSEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagt
ctagatcttgaatcacttcgtgcaagaaaacaagaacttattttctcaattcttaaatac
catgccgataaaggcgaagacatatatggcgaaggtatcttagaagttctacaagatggc
tatggctttttgagatcttctgatagctcatattttgcatctcctgatgatatctacgtt
tcacctgcttttatcaggaagttaaacctaagaactggtgatagtattgttggtaagatt
cgcccacctcgtgataatgaaaaatactttgcagtaaagcatattgacagtgttaacttt
gattcacctgaattagctagaaaaaaaatcctatttgaaaacctaactccagaatacgct
aaagaaaggctaactatggaaataggtaatggctcaagcgaagatataactgcgagagtt
attgatttagctgcaccatttggtaaaggtcagcgtggtctgatcgtagctcctcctaag
actggtaagacaattatgatgcaaaatattgcaacatcaattgccaaaaaccatcctgaa
tgtaacctaattatgctactaatcgatgagcgtcctgaggaagttacagaaatgcaacgc
tcagtgcgtggtgaagtagtagcatctacatttgatgaacctgcagctcgtcatgtccag
ttagcagaaatcgtaattgagaaagctaaaagactagtagaacacaaacaagatgtagta
attctacttgactcaatcacaagacttgctcgtgcttataacactgtatctccagcatca
ggtcgtgtactatcaggtggtgtagaggcaaatgctctgcaaaagcctaagagattcttt
ggtgctgcgcgtaatactgccgaaggtggtagtttaacaatcattgcaacagcacttgta
gaaactggctctaagatggatgaggttatctttgaggaattcaaaggtactggtaacatg
gaacttcatcttgatcgtaagattgcagagcgccgtgtattccctgctattagctttgat
agatctggtacgcgtagagaagagcttcttacaactccagaagaactacaaaaactttgg
gtactgcgtaagattcttggtggtatggaagatgttcaagctatggaattcctaacagaa
aaaatgaaaggttcattaactaatgaagagttcttcgagactatgaaaagaggtgctatt
taa
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