Francisella noatunensis subsp. noatunensis: FSC774_05195
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Entry
FSC774_05195 CDS
T07065
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Pathway
fnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSC774_05195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnn03019
]
FSC774_05195
03009 Ribosome biogenesis [BR:
fnn03009
]
FSC774_05195
Enzymes [BR:
fnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FSC774_05195
Messenger RNA biogenesis [BR:
fnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FSC774_05195
Ribosome biogenesis [BR:
fnn03009
]
Prokaryotic type
rRNA helicases
FSC774_05195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
NPHP3_N
SecA_DEAD
SNF2-rel_dom
Cas3-like_C_2
AAA_30
AAA_22
SLFN-g3_helicase
Uricase
Motif
Other DBs
NCBI-ProteinID:
QOG54909
LinkDB
All DBs
Position
1020373..1021461
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AA seq
362 aa
AA seq
DB search
MLFSDLNLSQNIIEILENKNIKIPTNSQILSFEKISNGENIWLKSPTGSGKTLAYILPIM
NKLLIDKKSLTQVVFFTPTHELAIQISNFINETFSSIGIKSLALIGKASIDRQKEKLKKK
PNIVVGSVGRILELIDQKKLKAAHLQYCIIDEADRMLEDDSLKLLKQIISKTTNLQYILG
SATIKNHAFDIASSFIENLELIDNSKEKETIEHSYITADGNRKTDTLRKLLNKISPSKSI
VFLHRNNDVDFVTKKIDKLECGVGSIHGEQNKIDRANTIKKFKSGQIKVLVASDVAARGL
DINDVDFVINYDIPSKAEDYQHRAGRTGRMGKSGNSILIIKETEFSYVEKLQKKLGIDIK
KF
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagacttaaacttaagccaaaacatcatagaaatattagaaaataaaaat
atcaaaatacctacaaactcacagattttaagctttgaaaaaatctcaaatggagaaaat
atctggctaaaatcaccaactggtagcggtaaaacacttgcttatattttgccaattatg
aataaattattaatagataaaaaatctcttacacaagttgtttttttcacacctactcat
gagttagccattcaaattagtaattttataaatgagacattctcaagtataggcattaaa
tcactagcactaattggtaaagcatcgatagacagacaaaaagaaaaattaaagaaaaaa
ccaaatattgtggttggctctgttggcagaattctagaacttatcgatcaaaaaaaacta
aaggctgctcatctacaatactgtattattgatgaggcagatcgtatgcttgaagatgac
agcttaaagcttttaaaacaaatcatctctaaaaccacaaatctacaatatatattaggc
tctgctactatcaaaaaccacgcctttgatattgcgagtagttttatcgaaaatttagag
cttattgataactccaaagaaaaagaaactatagaacatagctatatcacagctgatggt
aatcgtaaaaccgatacattacgaaagttactaaacaaaatatctccttccaaatctata
gtatttctacatagaaacaatgatgttgatttcgtcacaaaaaaaatagataaactagaa
tgtggggttggctctattcatggtgaacaaaataaaattgatagagctaataccatcaaa
aaattcaaaagtggacaaatcaaagttttagttgcatctgatgttgcagctagaggactt
gatattaatgatgttgattttgtaataaattatgatatcccatccaaagcagaagattac
caacatcgagcaggtagaacaggtcgtatgggtaagtccggcaatagtattctaatcatt
aaagaaactgaattctcttatgttgaaaaactacaaaagaagttaggaattgatattaag
aagttttaa
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