Francisella noatunensis subsp. noatunensis: FSC774_05740
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Entry
FSC774_05740 CDS
T07065
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Pathway
fnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSC774_05740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnn03019
]
FSC774_05740
03009 Ribosome biogenesis [BR:
fnn03009
]
FSC774_05740
Enzymes [BR:
fnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FSC774_05740
Messenger RNA biogenesis [BR:
fnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FSC774_05740
Ribosome biogenesis [BR:
fnn03009
]
Prokaryotic type
rRNA helicases
FSC774_05740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Utp25_C
Cas3-like_C_2
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOG54985
LinkDB
All DBs
Position
complement(1128386..1130137)
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AA seq
583 aa
AA seq
DB search
MNSETKKDFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAA
FALPLINNMDLESRDRAPQVLVLAPTRELAIQVAEQFQAFAKNIPNLDVACIYGGQEYGS
QIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVRYVLSHV
SDECQRLLFSATIPTDIADIIQEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALD
RLLEVEETDGVIIFVKTKTSTIEVADNLKALGYRVAAINGDMQQSQREYIVDQFRSAKSD
VLVATDVVARGIDLERISHVINYDMPNDSDTYVHRIGRTGRAGREGTSISLVPLKEMRFL
RTLERFTGSPMQEVFMPSAKDLAQSRIDHFKTRIASALDKNKSLDNYKEIITSIRDELEL
ELDSDELLAVLTLLAQGKKSFFPREIQARDDRPQRDRNLRGNSRDGRRNDRFERRGDRND
RNSRFDRSDKFDRSDRPDRKPRRTINIDLTTYKLEVGRDNDVQPRNIVGAIANEGNIDSK
HICNISIQKDHTLVDLPANLSPKVISHLRNVWVAGKKLNLTAQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaaactaaaaaagattttagtcagcttgggctgaaccaagatattatagat
actgttataaaattaggatatgaaaatccaacaccaattcaacagtatgctattccatat
atcttatcgggtagagatgtgcttggtcaagcgcaaacgggtacgggtaaaacggcggct
tttgcattacctttaataaacaatatggatttagaatctagagatagagctccacaagtt
ctggtactagctccgacaagagagttagctatccaggtagcagagcaatttcaagctttt
gctaaaaatataccgaacctagatgttgcatgtatctatggtggtcaagaatatggttct
caaataagagcacttaagcaaggtgtaaaagttgtagttggtacgactggtcgtgtgatg
gatcatatcgaaaaaggtacattacagctggataatctaagagcattagtattagatgaa
gctgatgagatgctgagaatgggctttattgatgacgttagatatgttctaagtcatgta
tcagatgagtgtcaaagattacttttttcagcgactattcctacggatatagcagatatt
attcaagaatatctaagaaatccttgtaagatacaagtaaaagcaaaaacaaaaactgca
aatactgtgacacaaaagttcatagtgattaaaggttttagaaagatagatgcgttagat
agattacttgaagttgaagaaactgatggtgttattatctttgttaaaactaagacaagc
actatcgaagtagctgataatctaaaagctcttggttatagggtggctgctattaatggt
gatatgcaacaatctcaacgtgaatatatagttgaccaatttagaagcgctaaatctgac
gttttagtagctacagatgttgttgctagaggtatagatcttgagcgtattagccatgta
attaactatgatatgcctaatgattccgatacgtatgtacatagaatcggtcgtacaggt
agggctggacgtgagggtacttcaatttctctagttcctttgaaagaaatgagatttttg
cgtactttagagagatttacaggttcgccaatgcaagaagtatttatgccaagtgcaaaa
gatttagcacaaagcagaatagatcatttcaaaactcgaatagcttcggcattagataaa
aataaatctctagataattataaagaaattattacgagcattcgtgatgagctagagtta
gagttagattctgatgagcttttggctgtacttacattattagctcaaggtaagaaatca
ttcttcccgagagaaatacaagctagagatgatagacctcaaagagatagaaatttaaga
ggcaactctagagatggacgcagaaatgatagatttgagcgtagaggcgatcgtaatgat
agaaatagtcgttttgatagatctgataaatttgacagatcagacaggcctgatagaaaa
cctcgtagaactataaatattgatttgactacatataagcttgaagttggtcgtgataac
gatgttcagccaagaaatatagtcggtgctatagctaatgaaggaaatatcgatagtaag
catatttgtaatatatctatccaaaaagatcatacattagtagatttaccagctaactta
tctccaaaggttataagtcacctaagaaatgtttgggttgcgggcaaaaaattaaatctt
acagcgcaataa
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