Francisella noatunensis subsp. noatunensis: FSC774_06495
Help
Entry
FSC774_06495 CDS
T07065
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Pathway
fnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSC774_06495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnn03019
]
FSC774_06495
03009 Ribosome biogenesis [BR:
fnn03009
]
FSC774_06495
Enzymes [BR:
fnn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FSC774_06495
Messenger RNA biogenesis [BR:
fnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FSC774_06495
Ribosome biogenesis [BR:
fnn03009
]
Prokaryotic type
rRNA processing factors
FSC774_06495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
Antiterm
DnaJ_CXXCXGXG
Flu_C_NS1
Motif
Other DBs
NCBI-ProteinID:
QOG55084
LinkDB
All DBs
Position
1277388..1280042
Genome browser
AA seq
884 aa
AA seq
DB search
MKKILINSKSSEETRIATLDNGKLIDLDIENVDREQKKANIYKGYISRIEPSLNAIFVNY
GEDKNGFLPFKEVSEYYLKDVPNVENIAHLLSEGQELIVQIDKEERGDKGAALTTFITLA
GSYMVLLPNNPDGGGISRRVEGEDREKLKKYLKDLNIPKNMSVIARTACVECSFEELKHD
FDTLVELWDSIFKAYHKIKKPALLHKESDIIVRTVRDHLKEDVKEIIVDSKECYEDVKRQ
LGLLRQSFDINKVKLYNEELPIFAQFGIDQQIENAYKREIRLPSGGSIVIDTTEALVAID
VNSSRANKAEDVETTAFKTNLEAAEEVARQLRIRDLGGLVIVDFIDMSFYPNRKQVEEKL
MEALQQDKARVQMSRISKLGLVEISRQRLSSSINESVMQKCPRCDGHGFIKTTQATALTI
LRKIRAEAIKEDTNEIRVQVPVDIAAYILNEKRDSIVEIERISEVKVMLIPNFNMESPKF
QMQRIWGTSYKSNRTSSDLIEDVFNVEIPKAGKKKIAAVELTKPTSNDQNLDAKEDKSQE
NKIIDANTTQDNKRESNTQQESKKKGFFSKLLTKLTDSTEAIAVENKEPQNKQYNNKDKA
QKPQKYQDKRPQKDINQRDDRNDNKNNNKGQKPQVQKSQDNRQERDNNQHNDRKNNDNRN
DRNKNKLSSDKFDKKSNNRSSSRSNNLNLNNAEEVVDITQLKYQNQTAEKTDNIKKVISK
NPEEFVSVMVKDVLENYNSLKDDGATKVATEEKAKTSKYLKFDTVLVDKEITLLKEAARQ
AEKAKQAEKIQNTEVEDSNNIHAEIKETIEIVDEVVVKEEQSKKAKLEKDDKISEQSSVK
KEKPKTTKNNKKEKTVEKANKQNQPEPEYINYSAALDFESQSII
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatactaataaatagtaaaagtagtgaagaaacaagaattgctactctagat
aacggaaaacttattgatttagatattgaaaatgttgatagagagcagaaaaaagctaat
atttataagggctatatttctagaattgaaccaagtttgaatgcaatatttgtcaactat
ggtgaagataaaaatggttttttaccattcaaggaagtttctgagtattatctaaaagac
gtaccaaatgttgaaaatattgcacatcttctttcagaaggtcaagagttaatagtacag
attgacaaagaagagcgtggtgataaaggtgcagctttaactacatttatcacacttgca
ggctcatacatggtattgctaccaaacaacccagatggtggcggtatttcacgtcgtgta
gagggtgaggatagagaaaaacttaagaaatatctaaaagatttaaacatccctaaaaat
atgagtgtaattgcaagaactgcttgtgtagagtgctcttttgaagagttaaaacatgat
ttcgacactctagttgagttatgggattcaatatttaaagcttatcataaaatcaaaaag
cctgccctacttcacaaagagagtgacataattgtcagaacagttagagatcatctaaaa
gaagacgtcaaagaaattattgtagattctaaagaatgctatgaagatgttaaaagacaa
cttggcttacttagacaaagttttgatattaacaaagtaaaattatacaacgaagaatta
cctatatttgcacagtttggtatcgatcaacaaatagaaaatgcctataagagagaaatt
agattaccttctggtggttctattgtaattgacacaacagaagccttggttgctattgat
gttaactcatctcgtgctaacaaagctgaagatgttgaaactactgctttcaaaacaaac
ttagaagctgctgaagaagttgctcgccaacttagaatcagagatcttggtggtctagtt
atcgttgattttattgacatgtcattctatccaaatagaaaacaagtcgaagaaaaatta
atggaagcactgcagcaagataaagcacgcgttcaaatgtcacgcatatctaaacttgga
cttgttgaaatatctagacaacgcttaagctcatcaatcaatgaaagtgtaatgcaaaag
tgccctcgttgtgacggacatggtttcataaaaacaactcaagccactgcacttactatt
ttacgtaaaattagagcagaggctatcaaagaagatactaatgagatacgtgttcaagtc
cctgttgatatagctgcatatatactaaatgagaaaagagatagcattgtcgaaattgaa
agaatctctgaagttaaagtcatgttaattcctaacttcaacatggaatctccaaagttt
caaatgcaaagaatttggggtacaagctacaaatcaaatcgtactagctctgacttaata
gaagatgtatttaacgttgaaatccctaaagcaggaaaaaagaaaattgctgcggttgag
ctaaccaaaccaacgtctaacgatcaaaacttagatgctaaagaagacaagtctcaagaa
aataagatcattgatgctaatactactcaagacaataaaagagaaagtaatacgcaacaa
gaatcaaagaagaaaggtttctttagcaaattattaactaagcttacagatagtactgaa
gctattgctgttgagaataaggaacctcaaaataaacaatacaacaacaaagataaggct
caaaaacctcaaaagtatcaagataaaagaccgcaaaaagacattaatcagcgtgacgat
cgcaacgataataaaaataataataaaggtcaaaaacctcaagtccaaaagtctcaagac
aacagacaagaaagagacaataaccagcataacgatcgtaaaaacaatgataataggaat
gatcgtaacaaaaataaattaagtagtgataagtttgataaaaaatcaaacaatcgcagt
agtagcagaagcaacaatctaaatcttaataatgctgaagaggttgttgatattactcag
cttaagtatcagaatcaaactgctgaaaaaactgacaatatcaagaaagtaatatctaaa
aatcctgaagagtttgtctctgttatggttaaagatgttttagaaaactataatagctta
aaagatgatggtgctacaaaagtagctactgaagaaaaagcaaagactagtaaatatcta
aaatttgatactgttttagtcgataaagaaataactcttcttaaagaagctgctagacaa
gctgaaaaggctaaacaagctgaaaaaatccaaaacactgaagtagaggatagcaacaat
attcatgcagagataaaagaaactattgaaatagttgatgaagtagttgtaaaagaagag
caatctaaaaaagctaaactagaaaaagatgataaaatatctgaacaaagtagcgtaaaa
aaagaaaagcctaaaactaccaaaaataataaaaaagaaaaaacagttgaaaaagctaat
aaacaaaatcaacctgagccagaatacataaattattctgcagctcttgattttgaatca
caatcaataatctaa
DBGET
integrated database retrieval system
