Francisella noatunensis subsp. noatunensis: FSC774_08005
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Entry
FSC774_08005 CDS
T07065
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Pathway
fnn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FSC774_08005 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fnn03021
]
FSC774_08005 (rpoB)
03400 DNA repair and recombination proteins [BR:
fnn03400
]
FSC774_08005 (rpoB)
Enzymes [BR:
fnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FSC774_08005 (rpoB)
Transcription machinery [BR:
fnn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FSC774_08005 (rpoB)
DNA repair and recombination proteins [BR:
fnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FSC774_08005 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-ProteinID:
QOG55306
LinkDB
All DBs
Position
complement(1563351..1567427)
Genome browser
AA seq
1358 aa
AA seq
DB search
MSYSYAEKKRIRKEFGVLPHILDVPYLLSIQTESYRKFLNADDAKGRLHSGLELVLKQSF
PVESKNGQYELHYVDYQIGEPTFDETECQVRGATYDAPLNVKLRLVIYNKEILPSEKVVE
DIREEYVYMGDIPLMTTNGTFIINGTERVVVSQLHRSPGVFFSKDDSEEGAFSARIIPYR
GSWLDFEFDSKGIIWARIDRKRKFCATVILKALGYTQEEILNRFSDRRTISFNNKGFALK
LDDLSSMKGEVLKFDIIDEKDNIIVKKNKKLTSRDIKKIKDSGVDSVAIDFDLVSTLRVA
KDIVNEATGEVIAYANDDVTENLLEACVEAGMLELEVIDFITTERGRYISDTLKYDLTKN
TDEALVEIYKVLRPGDPPAEASVKALFEGLFFIESRYSLSDIGRMKLNARLGSDNVSKDI
YTLENSDIVGVIEELINIRDGKGKVDDIDHLGNRRVRSVGEMVENQFRIGLYRVEKGIRE
SMSLVHKDKLMPKDIVNSKPITAAIKEFFTSGALSQFMDQDNPLSEVTHKRRISALGPGG
LSRDRAGFEVRDVHATHYGRLCPIETPEGPNIGLINSLASYARVNDYGFLEAPYRKVVNG
KVTNEIEYLSAIDEDHYVIAQASTKLDKNNHFVEDLIQCRSGGEAIFTESSRVQYMDVSA
KQMVSAAAALIPFLEHDDANRVLMGANMQRQAVPTLKSEKPLVGTGIEKIVARDSGNCII
ARNVGEIAEVDSNRIVVKVDTEKSKTSKLVDIYSLTKFKRSNKNTCINQRPIVNVGDKIE
AGDILADGFATDFGELSLGHNLMVAFMPWNGYNFEDSILLSERIVKDDKYTSIHIEEFTC
VARDTKLGPEEVTADIPNVSESSLAKLDESSIVHIGANVEAGDILVAKITPKAEQQLTPE
ERLLRAIFNEKASNVADSSLRMPSGTSGTVINVQVFENDKGGKSKRALKIEKELIDKARK
DFDEEFAVIESVVKSSIETDVIGAKIQKAKGLKKGAVLTKEFLATLPFSKWLEISFEDEK
LEQKVQNAREYYEEAKIAVDARFEAKKKSIMQSNELSPGVLKTVKVFVAIKKRIQPGDKM
AGRHGNKGVVSRVLPVEDMPYMEDGTPVDVCLNPLGIPSRMNIGQILEAHLGLASYGLGK
KIEQTLEKTRKAAELRKTLEEVYNSVGDKKVDLKALNDEEILNLCENLKGGVPIATPVFD
GAKEEDIKSLLKIGGFATNGQMKLFDGRTGKPFDRHVTVGYMYMLKLDHLVDDKMHARST
GSYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLREMLTVKSDDITGRSKMYKNI
VDGKLTMNVDVPESFNVLRNEVRALGIDMDFDYSSEEE
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactcatacgctgagaaaaaaagaattcgcaaagagtttggggttcttcctcat
atcttagatgtgccatatttactttccattcaaacagagtcttatagaaaatttttaaat
gcagatgatgcaaaaggtagacttcactctggtcttgaattagtgcttaagcaatctttt
cctgtagaaagtaaaaatgggcaatatgaacttcattatgtcgattatcaaattggtgaa
cctacttttgatgaaacagagtgtcaggtacgtggtgctacatacgatgctccattaaat
gtgaagttaagattggttatatataacaaagaaatccttcctagcgaaaaagtggtagag
gatattagagaagaatatgtctatatgggcgatattcctcttatgacaactaatggtact
tttataattaatggtacagaaagagtagttgtgtcacagttacatagatcacctggtgta
ttctttagtaaggatgattcagaggaaggtgcgttttcggcacgtattattccttacaga
ggttcatggcttgattttgagtttgactcaaaaggtattatatgggctagaatcgacaga
aaaagaaaattttgcgctacagtaattttaaaagctcttggatatacgcaagaggaaata
ttaaatagattctctgatagaaggacaattagttttaataataaaggttttgcacttaag
cttgatgatctttctagtatgaaaggtgaagtgcttaagtttgatattattgatgaaaaa
gataatataattgttaagaaaaataaaaaattaacatctagagatattaagaaaatcaaa
gattcaggagttgattctgtagcgattgattttgatttagttagtactcttagagtggca
aaagatatcgttaatgaagctacaggtgaagtgatagcttatgctaatgacgatgttaca
gaaaatttattagaagcatgtgtagaagcgggcatgcttgaattggaagttattgatttt
ataactactgaaagaggtagatatatatcagataccctgaaatatgatcttactaaaaat
acagatgaagcacttgtagaaatatataaggttcttagacctggtgatcctccagcagaa
gcttctgtaaaagcgctatttgagggactattctttattgaaagtagatatagcttatct
gatataggtagaatgaagctaaatgcaagattaggctctgataatgtatctaaagatatt
tatactttagaaaatagtgatattgtaggtgttatcgaagaacttattaatatccgtgat
ggtaaaggcaaagttgatgatatcgatcatctaggtaatagacgtgttcgttctgttggt
gagatggttgagaaccagtttagaattggtctttatagagtagaaaaaggtatccgtgag
agtatgtctttggtacataaagataagcttatgcctaaagatattgttaactctaaacca
attacagcagcaatcaaagaattctttacatcgggtgctttatctcagtttatggatcaa
gataatccactatctgaagtaactcataaaagaagaatttcagcactcggtccgggtggt
ttatcgcgtgatagagcaggctttgaagttcgtgatgttcacgcaactcactatggtaga
ctatgtcctattgagactccagagggtccaaacattggtctgattaactcattggcaagt
tatgcacgagttaatgattatggctttttagaagcaccatatagaaaagtagttaatggt
aaagtaactaatgaaattgagtatttatcagctattgatgaagaccattacgtgattgcc
caagcatcaactaaacttgataaaaataaccacttcgtagaagatcttattcagtgtcgt
tctggtggtgaggcaatatttactgagtcaagtagagttcagtatatggatgtttctgct
aaacagatggtttcagcagctgcagcattaataccattcttagagcatgatgatgctaac
agggtattgatgggtgcgaacatgcaacgtcaagctgtaccaacgcttaaatctgaaaag
cctctagtcggtacgggtatagagaagattgttgcaagagactctggtaactgtattatc
gcaagaaatgttggtgagatagcagaagttgattctaatagaatagttgttaaagttgat
actgaaaaatctaaaacaagcaagttagttgatatttacagcctgactaagtttaagcgt
tcaaataagaatacttgtatcaatcaacgtccaatagttaatgttggtgataagattgaa
gcgggtgatattttggctgacggttttgcaactgattttggtgagttatcacttggccat
aatcttatggttgctttcatgccgtggaatggttataactttgaggattcaattttactt
tctgagagaatagtaaaagatgataagtacactagtatccatattgaagagtttacatgt
gtggctcgtgatactaaattaggccctgaagaagtaacagcagatattccaaatgtaagt
gagtcgagtcttgctaagcttgatgagtcaagtattgttcatatcggtgctaatgttgag
gctggcgatattcttgtagctaagattacaccaaaagctgagcagcagttaactcctgaa
gaaagacttcttagagcaatctttaatgaaaaagcatcaaatgtagctgatagttcatta
agaatgcctagtggtacttcaggtactgtaattaatgttcaggtttttgaaaatgataaa
ggtggtaagagtaaaagagctcttaaaattgagaaagaactaattgataaagcgcgtaaa
gatttcgatgaagaatttgctgtgattgaatctgtagttaaatcatctatcgagacagat
gtgattggagctaagatacaaaaagcaaaaggacttaagaaaggtgctgttcttacaaaa
gaatttttagcaactttacctttttctaaatggctggaaatttcttttgaagatgaaaaa
cttgagcaaaaagtacagaatgctagagagtattacgaagaagcaaaaatagctgtagat
gctagatttgaagctaagaaaaaatctatcatgcaaagtaatgagttatctcctggtgta
cttaagactgttaaagtttttgtcgctattaaaaagcgtattcagccaggtgataagatg
gctggacgtcatggtaacaaaggtgtggtttcacgagtgttaccagtagaggatatgcca
tatatggaagatggtactcctgtagatgtctgtttgaatccactaggtattccttcgcgt
atgaatatcggtcagattctagaggctcatttaggattagcttcttatggcttaggcaag
aaaatagagcaaactctagaaaaaacaagaaaagcagcagagttaagaaaaactttagaa
gaagtatataatagtgtaggtgacaagaaagttgatctcaaagctttaaatgatgaagag
atattgaatctttgtgaaaatctaaaaggaggagtgccaattgctacccctgtatttgat
ggtgcaaaagaagaagatatcaaatcattgctaaaaataggtggctttgcaactaatggt
cagatgaaactatttgatggtcgtaccggtaaaccatttgataggcacgtaacggttggt
tatatgtatatgcttaagttagaccatttagtagatgataaaatgcatgctagatcaact
ggatcttatagcttagttacgcaacaaccattaggtggtaaagcgcaatttggtggtcaa
agattcggtgagatggaagtttgggcgttacaagcatatggtgctgcttatactctaaga
gagatgttaacggttaagtcagatgacataactggtagatctaagatgtataagaatata
gttgatggtaagttaactatgaatgtagatgttccagaatcatttaatgttttaagaaat
gaagttagagcattgggtatagatatggattttgactattcatctgaggaagaataa
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integrated database retrieval system
