Francisella noatunensis subsp. noatunensis: FSC774_08130
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Entry
FSC774_08130 CDS
T07065
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Pathway
fnn03420
Nucleotide excision repair
fnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FSC774_08130
03430 Mismatch repair
FSC774_08130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnn03400
]
FSC774_08130
Enzymes [BR:
fnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSC774_08130
DNA repair and recombination proteins [BR:
fnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FSC774_08130
MMR (mismatch excision repair)
Other MMR factors
FSC774_08130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
DUF4252
CarD_TRCF_RID
AAA_11
DUF2018
Motif
Other DBs
NCBI-ProteinID:
QOG55323
LinkDB
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Position
complement(1586789..1589017)
Genome browser
AA seq
742 aa
AA seq
DB search
MFNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQYDINYAHIYTAYEERLLL
DNALDFADLLLYLYELFSLNQQLREYYQSLFRYILIDEFQDTNQVQYMWLKLLVTDNNYM
MAVGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDDGVDYSDMAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIVNTPTRGIGNKTL
DTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKLLET
VINESGLLASYQEKDIEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADENADSVQLMTIHASKGLEFRYIFLVAAEEGVFPPSSIVNAEEAYTSAESKKVQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKLTGV
SQNKPKVKQKSNFGVSPFDFLKSNNTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKEFYT
VDFGVDVGQKILLADIANLVKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagactttctttcagggttaaatccccaacaaaaaaaagcgaccttgcta
gaggatcgtaattctttgatacttgctggagcgggtagtggcaaaacaaaagttttaact
tctcgtatagcatatctctgtcgtgataaaggagtatctgtagaaaatattctagctgta
acatttacaaacaaagccgctaaagaaatccagcatcgagttgagaaaatgcttggaatt
tcaacttttggtatgtggataggtacttttcacggtattgctcatagattattacgtaag
catgctcatgagttgggcttagataagaactttaggattcttgatcaagatgagcaagct
caattaatcaaaaaagtaattaagagtttggatcttgatgataaaaaatatccaccaaaa
ttattgcaaaactttattaataaacaaaaagataaggctgttcgtagtaacaaattaaca
aagcagtatgatattaattatgctcatatttatactgcttatgaagagaggttgctgtta
gataatgctttagattttgccgacttacttttgtatttatatgaattgttttctcttaac
caacagcttagagaatactatcagagtttattcaggtatattttgatagacgagtttcag
gatactaaccaagtccaatatatgtggttgaagttacttgttacagataataactacatg
atggctgttggtgatgatgatcagtcaatatatggttggcgtggagccgttgttgataat
attcacaaatatgtcgcagatctaaatgatgttgaaatcataaagttagagcaaaattat
cgttcaacgaagaatattcttaaagtagccaattctgtaatcaaaaataatgataataga
atgtcaaaagaactatggtctgctgctgaagatggcgaaaaagttgaagtatattgtgca
gttaatgagcgtgatgaagcgaaatatattatagataaaattcgccaattacatgatgat
ggagttgattattctgatatggcaattttatatcgctcaaactatttgtcgcgggtcctt
gaggagagttgtatttatgcaagtataccttataggatttatggaggttttcgtttcttt
gatcgagctgaagttaaggatgccttagcatatttaagattagctgttacaagtaatgac
aacttagcatttgagagaattgttaatactccaacacgagggattggcaataaaacttta
gatacaattcgtaatttctcacagattaataatgtgtcatattggcaagccactatagat
attatccagaaagaaattgtaacaaaaagaaccgcgtctcttctgttaaagtttatagaa
attataaatgctatttcatcacaaataaaagacttaagtctagataagcttcttgaaact
gtaatcaatgaaagtggtttgttggcgtcataccaagaaaaagatatcgaaaaagatcgt
caaaaaattgataacttaaaagaattaataagtgcagctaaagattttgaaccgcagata
gagttacttgatgataatactgatatactacaagattttttgtcttttgcagtgctagaa
gctggtgagatgcaggctgatgaaaatgcagatagtgttcagttaatgacaatacacgca
tcaaaaggtttagagtttcgctatatcttcttagtggcggcagaagaaggagtttttcct
cctagttcgattgttaatgctgaagaggcatatactagtgcagaatctaaaaaagttcaa
gaaaagttagctgaagagagacgcctattttatgtagccgttacaagagcgatgaaggct
ctaaccattagctatgctcaagtgcgtaatatctttggcagaagtagtttccaagtcaaa
tcacgttttcttatggaaatagactctgaacatattaacgaaggtaaattaactggagtt
agtcaaaataagcctaaggttaagcaaaagtctaactttggagtatctccttttgacttt
cttaagtcaaataacacaaaaggcaataagttcaaaaaaggagataaagtgttccataaa
gtctttggtaaggggatttttgtcaaagcacaatctcaaggttcaaaagagttttatact
gtagactttggtgtagatgtcggtcagaagattttattggcagatattgccaatcttgtt
aaggtctaa
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