Francisella noatunensis subsp. noatunensis: FSC774_08240
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Entry
FSC774_08240 CDS
T07065
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fnn
Francisella noatunensis subsp. noatunensis
Brite
KEGG Orthology (KO) [BR:
fnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fnn03016
]
FSC774_08240
Enzymes [BR:
fnn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FSC774_08240
Transfer RNA biogenesis [BR:
fnn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FSC774_08240
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
FAD_syn
TetR_C_19
Motif
Other DBs
NCBI-ProteinID:
QOG55340
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Position
complement(1616262..1618136)
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AA seq
624 aa
AA seq
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MLLENQSIKNALVIFKSKPAKVVEILDKKIEIETLDSKNIKLPSKNVQILTVVENDFDLD
KLEKLEIPELELTWELLQEQQQTSIDELSELLFESVGANQAYTIWLLVSEGEYFSFNEDF
TINIHSQEQKNQIVSDKQEKLKKEQELNDFIERLNNKTFNIEDAKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPYLYRYGAELESNSAEFKYNSGSDSQRVD
LTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEARARGSNLYL
PEHIITMLPPQATQKLGLGLQEVSPALSVGFRLDESGDIHDIEICFSNIKVTRYSYELVE
ENISALELGDIEVYTKYFTDKRLAKGAVELDFPEIKISLDNDKNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLEQDDLDNIDSIADMFATRKKLQRGKYSTE
PDVHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMIGIEDVDNIIAQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQAAVIEKLDKGRLMVSIADLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEEN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaaatcagagcatcaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaactttagatagtaagaatata
aaattaccttcaaaaaatgtccaaatactcacagttgtagaaaatgattttgatttggat
aaacttgagaaattagaaattcctgagttagagttaacatgggagttattacaagagcaa
caacaaacatcaattgatgagttaagtgagcttctttttgaatccgtaggagctaatcaa
gcttatactatatggcttttggtttcagagggagagtattttagctttaatgaagacttt
actatcaatattcattcacaagagcaaaaaaatcaaatagttagcgataaacaagagaag
ctcaaaaaagaacaagaactaaatgatttcatagagcgtcttaataataagacttttaat
attgaagacgcaaagttccttaaagagatagaggctttagcaacacttaaaagtacaaag
tgtcgtttctttaaatacttaaatatggaagagtctgagaatagtgcgtataagctactc
ttggatattggttattgggatgaattctttaatccttatctatatcgatatggtgctgag
ttagaaagtaattctgcggaatttaaatataattctgggtcagatagtcagcgtgtcgat
ctaacgcatctgactgcttatgctatagatgatgagggtagtaatgaccctgatgatgcg
attagttgggatgctcaacaaaataaaatgtgggttcatatagctgatccatcgtctagt
attagttttggcgatgaagtagatcttgaggctagagcgcgaggttctaacttatatttg
ccagagcatataattacgatgttgccacctcaagcaacacaaaagttaggtttaggccta
caagaagtatctccagctttgtcagtaggatttagacttgatgagtcaggtgatattcat
gatattgagatatgttttagtaacataaaagttactagatattcttatgagttagttgaa
gaaaatatctctgctctagaacttggagacatagaggtttatactaaatatttcactgat
aagcgtttggcaaagggagcggtagaacttgattttcctgagataaaaatatcattagat
aatgataagaatgtcaagctaactgacttaccacgcttaaactcaagaacattggtacgt
gatactatgctgatggctggagttgcgattggacagttttgtaaagaaaataatatttgt
gtacctttttcgacacagccggagcatgatcttgagcaagatgatttagataatattgac
tcgatagccgatatgtttgcaacacgtaaaaagctccaaagaggtaaatactctacagaa
cctgatgttcacgcaggtatgggtttagactcttatgtacaagtgacaagccctctaaga
agatatttagatttacttgttcattatcaattacgcaatttcttagaaaataagcaaatg
attggtattgaggatgttgataatataatcgctcaagtagatattcctattaagtcaaat
aggcaaacggagcgtttttctaattctcattggaaattagtctatctaatgcagaatcct
aatttagagttccaagcagcagtcattgaaaaattagataaaggtcgtttaatggtttct
attgcagatttagcgatgactaaaaaacttgctgttagtggtaagtatgatttaaatgat
caaataaaattacaaaacacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagaattaa
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