Fervidobacterium nodosum: Fnod_0018
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Entry
Fnod_0018 CDS
T00579
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
fno
Fervidobacterium nodosum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_8
PAS_8
PAS_10
PAS_7
AAA_5
AAA_2
Diguanyl_cycl_sensor
AAA
HTH_50
HTH_30
SAF
PAS_2
HTH_28
Bac_DnaA
RDM
Motif
Other DBs
NCBI-ProteinID:
ABS59891
UniProt:
A7HJ08
LinkDB
All DBs
Position
17594..19282
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AA seq
562 aa
AA seq
DB search
MERILKFVLDSVIEGIILVDKDAKVVYVNNNACKLLGLNPDIIGRPVEEVVNNTRLHIVV
RNGIPEIDQVQYTGNAIIITSRIPLRDENGNILGAVAVFRDITSIRKLAEEITNLKEIEA
QLKAIIESTNDAISVADENGIVRLVNKAYTRITGFSPEEVIGKPATVDIAEGESIHMLIA
RTRQPIYNARLKVGPAKKEVIVNATPLFVKGQFKGSVAVVHDVSEILQLTNELEEVKRLI
RYMKAQYTFDDIIGDSKLIQIAKEQAKKVAQTPATVLLRGESGTGKELFAHAIHNSSPRR
SKPFVSVNCATIPESILESELFGYEEGAFTGALRGGKKGLIEEADGGTLFLDEVGKLPLP
LQPKLLRFIETKEFVPVGGRNVRKVDVRIIAATNVDLEKMVKNGEFLPDLYFRLNVFPIY
LPALKDRKEDIPKLALHIVKKLNQQYGRMVEGINPTVLKYLVNMDWPGNVRELENFLGRV
MINMGPEERVIEPKHLPENIELKRTKAKEAISIGSLKELIEDYEKKIIAEALKKTGGNKE
ETAKLLDISIRTLYYKIEKYGL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaatcttaaagtttgttctggattcagttattgaagggattattcttgttgac
aaagatgcaaaagtagtttatgtaaataacaacgcatgcaagcttttaggactgaacccg
gatataatcgggcgacctgttgaagaagttgtcaataacacacggttacatattgttgtt
cgtaacggaataccggaaatagatcaagtccagtatactggtaatgctataatcataacc
tcgagaataccattacgtgatgagaatgggaatatacttggtgcggttgctgtgttcaga
gatataacaagcattagaaaattagcagaggaaattacaaaccttaaagaaattgaagct
cagctaaaggcaatcatagaatcaacaaatgatgctattagtgtagctgatgaaaatgga
attgtgcgccttgttaataaagcttatacaagaattacaggtttttctccagaggaagta
attggtaaaccagcaacagtagatatagctgaaggtgaaagtatacacatgcttatagct
cgcactaggcagcctatatataacgcaaggttgaaagtcggaccagcgaaaaaagaagtt
atagttaatgccactccacttttcgtaaaaggacaattcaaaggcagtgttgcagttgtg
catgatgtttctgaaattctacaactgacaaatgaacttgaagaagtaaagagattaatt
cgatatatgaaagctcaatatacttttgatgacataatcggtgatagtaaattaattcaa
atagctaaggaacaagcaaagaaagttgcccaaacacctgctacagttctattgagagga
gaaagtggaacgggaaaagaattatttgcccacgcaattcacaattcgagcccaagaaga
tcaaaaccctttgtaagtgttaactgtgcaacgatacctgaatcgatacttgaatctgaa
cttttcggatacgaagaaggagcgtttaccggtgcactgagaggtgggaaaaaaggacta
attgaagaagcagatggtggaacattatttcttgatgaagttgggaaattgcctctacct
ctacaacctaaattgttaagatttatagaaacaaaagaatttgtaccagttggaggtaga
aatgtaagaaaagtagatgtgagaataatcgcagctacaaatgttgacttagaaaaaatg
gtaaagaacggagaatttctaccagacctttattttagattaaatgtatttcctatatac
cttccagctttaaaagatagaaaagaagatattccgaagcttgctttacatatagtcaaa
aaacttaatcaacaatacggtcgcatggttgaaggaatcaatccaacagttcttaaatac
ttagtaaatatggactggcctggcaatgttcgagaacttgagaatttcttgggaagagtt
atgataaatatgggacctgaggaaagagtgattgaaccaaagcacttgcctgaaaatatt
gaattaaagagaacaaaggctaaagaagcaatttccataggttccctgaaagagcttata
gaagattatgagaaaaagataatagcagaggcacttaagaagacaggaggtaacaaggaa
gaaacagcaaaattgttggatataagtataagaacattgtattataagatagaaaagtac
ggtttatag
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