Fervidobacterium nodosum: Fnod_0299
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Entry
Fnod_0299 CDS
T00579
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
fno
Fervidobacterium nodosum
Pathway
fno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Fnod_0299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fno03400
]
Fnod_0299
DNA repair and recombination proteins [BR:
fno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Fnod_0299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
ATG17_like
PALP
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABS60164
UniProt:
A7HJT1
LinkDB
All DBs
Position
complement(323699..326110)
Genome browser
AA seq
803 aa
AA seq
DB search
MLSIEKNLEDKINYLEYIKNKIDYNLVLDGYKQYCYSSLGKEYLENLNPYSINPAQELQY
LSELCDIVRVIGYPTSDAFLDIRSILRKIENGIIAEGLEFLSLLRFFEGIKSLKAMFKEQ
KPSLFQSGIVNLILGLGTYDEIINSIKKTIDENGNIKDDASVLLKKIRNEYAEVTKELRH
KAERFITHHQNILQEVTYTIRNDRYVFPVKANERGKIKGIVHGMSSSGLTVYLEPEEFIP
LNDKLKVLAEEEGKEIARILREITNKIFDRLSTIKGDIELLKRIDSLYARVRYVIEKNAS
IIIPDGNYLKLSRARHPLIPEDKIVPIDIELPSDKFGIVITGPNTGGKTVSLKTVALFII
LARSGFPVLAGESSRIPDFDVYVDIGDSQNILENLSTFSGHLHNIVQLLKLADENSIVLI
DELGSGTDPYEGSAIALGIIEELIERRIKFIVTTHLTPIKLFSMSHDKLISASMEFDPET
LSPTYRILMNIPGASHAFEIAKKYGLPDAILERAQKHLDEEHIKIEELIKNLNKHISELE
TKRRELENTLREYNRQKKDFEEKYKLLKIKRIEEFDKELREVYKDIQKAKKDLQISLQSK
KTESEELIKKRLKEIENEVKHLEEIQGKVEKVIYETKVTDEEKQISVGDYVRLIDGTAIG
KVIEMKSRNFVVDFNGLKIEVKPEKLVKVTSGSDSKDLKKHIDEEKEKIVNVSRIPTKVY
TSNLTKNEVDVRGLTVEEALEIIDEFIDQLLLSDFSIGYIIHGKGTGKLATGIWNYLRHD
KRVKNYRFGRPDEGGVGATVIEV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaattgaaaaaaatttagaagacaaaatcaattatttggaatatattaagaat
aaaatagactacaatctcgtactcgatggctataaacagtattgctattcttcgcttgga
aaggagtatcttgaaaatcttaatccgtacagtataaaccccgcacaagaactccaatat
ctctcagaattgtgcgatatagtccgcgtgattggttatcctacttccgatgcattttta
gacatcagaagtatactgcgaaaaatagagaatggaataatcgccgagggtttagaattt
ctgagtcttctaagattctttgaaggaataaaatcactaaaagcgatgttcaaggaacaa
aagccctcattatttcaaagtggtatagtaaatcttatacttggattaggaacatatgat
gaaataattaattccataaagaaaactatagatgaaaatggcaacataaaagatgacgct
tccgtgttgttaaagaagattcgaaatgaatatgccgaagtaaccaaagaattaaggcat
aaagcagaaagatttataacccatcaccaaaacattttacaagaagtaacatacacgata
agaaacgataggtacgtatttcctgtcaaagcaaatgaacgtggaaaaattaaaggtatc
gtccatggtatgtcatcatctggactaacggtatacttagaaccagaagaatttatacca
ctgaacgataaactgaaagttcttgctgaagaagaaggaaaagaaatagcaaggatatta
cgggaaattaccaataaaatttttgacagactgtcaactataaaaggtgacattgaattg
ttaaagcgtatagattcactttacgcaagggtaagatacgttatagaaaagaatgcttct
attattatcccagatgggaattatctcaaattatcaagagcaaggcatcctcttatacca
gaagataagattgttccaatagacatagaactcccatctgacaaatttggaatcgtaata
acaggacccaacacaggtggaaaaaccgtttctctaaaaactgtagcacttttcataatt
ttggcacgtagtggcttccccgttcttgcaggcgaaagttctaggattccagattttgat
gtgtatgtagatataggcgatagccagaacatactcgaaaatctaagtactttttcaggt
catttgcataatattgtacaacttttaaaattagctgatgaaaattcgatagttctaatc
gatgagcttggttcgggaacagatccatacgaaggaagtgccattgcccttggcattatc
gaagaattaattgaaagaagaataaaattcatagttacaacacatctaacacccataaag
ctcttttcaatgtctcacgataagcttataagcgcttctatggaatttgatcctgaaaca
ctttccccaacgtacagaatattaatgaacattcctggagcatcacatgcttttgagata
gccaaaaagtacggtttaccagatgcaatattggagcgtgcacaaaagcatcttgacgaa
gaacatataaagatagaagaattaataaaaaacttgaacaagcatatcagcgaacttgaa
acaaaacgaagagaactcgaaaatacactaagagaatacaataggcaaaagaaagacttt
gaggaaaaatacaagcttttgaaaataaaaaggatagaagagtttgataaagaacttcga
gaagtttataaagatattcaaaaagcaaaaaaggatttgcagatatctctgcaaagtaaa
aaaacagagagtgaagaattaataaaaaaacgtctcaaagaaattgaaaacgaagtaaaa
catttagaagaaattcaggggaaagtagaaaaggttatctatgaaacaaaagtcacagat
gaggaaaaacaaatttcagtaggtgattacgttagacttatcgatggaactgcaattgga
aaagtaattgaaatgaaatctaggaattttgtcgttgatttcaatggattgaaaatagaa
gtaaaacctgaaaaactcgttaaagtcacctcgggtagcgactcaaaagatttaaaaaag
catattgatgaagaaaaagaaaaaattgtaaatgtttcacgcattccaacaaaggtttat
acttcaaatttaacaaaaaacgaggttgacgtaaggggattaactgtagaagaggcactg
gaaataatagatgaatttatagaccaattattattatcagatttttcaatcggttacatt
atccatggaaagggaacaggtaaacttgcaactggaatttggaattatttaagacatgat
aaaagagttaaaaattaccgttttggcagacctgatgaaggtggagttggagcaacagtt
attgaagtttaa
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