Fervidobacterium nodosum: Fnod_0360
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Entry
Fnod_0360 CDS
T00579
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fno
Fervidobacterium nodosum
Pathway
fno03030
DNA replication
fno03410
Base excision repair
fno03420
Nucleotide excision repair
fno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fnod_0360
03410 Base excision repair
Fnod_0360
03420 Nucleotide excision repair
Fnod_0360
03440 Homologous recombination
Fnod_0360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fno03032
]
Fnod_0360
03400 DNA repair and recombination proteins [BR:
fno03400
]
Fnod_0360
Enzymes [BR:
fno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fnod_0360
DNA replication proteins [BR:
fno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Fnod_0360
DNA repair and recombination proteins [BR:
fno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Fnod_0360
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fnod_0360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
RNase_H_2
HHH
Motif
Other DBs
NCBI-ProteinID:
ABS60225
UniProt:
A7HJZ2
LinkDB
All DBs
Position
complement(389936..392632)
Genome browser
AA seq
898 aa
AA seq
DB search
MARVFLFDGTGLLYRAYFAIDQSLTTTSGVPTNALYGLSRMLVKFLKEHVIINEDYCAFM
LDVKGGSTYRKELYADYKAHRPETPEPLLKQISLADELIEGFGIKLIKVPGYEADDVIAT
LAKKFEKEKQKYNISEINIITSDKDMLQLVNENIFVWRVEKGVTDLKKYTNNEIIEKYGI
TSEQIKDYLALVGDVSDNIPGVSGIGEKTAAKILNEFGSVENALKNISKLPEKIRNAIEN
NIEDFELSRKLVELNTNVEIKIDIEELLYKGYDQKKLLNVLKKFEFSSVIKELNLSAELT
NKVEYKVIENERALSDLLETIMKSKKIALDLETTSLDPFEGKIVGISIAVDEGKAFYIPI
AHVGAKNIPIESVKKFLRDLFNSGKTVGGHNIKFDLKFISRLGIEPQIPSFDSMIEAYLL
NPNEKKFNLDELSLKLLGHKMISYEDLVKDTIPLFAGDFSYIPVDTAVKYSCEDADMSLR
IHNLLHPLIYSNEMNELYEKIELPMILVLANLELNGVYFDIQYLNNLSQEMDKKLLALSN
RIFEITGEAFNLNSPKQLGYILFEKLKLPSVKSTSTGAYSTDVEVLEYLANEYEIAKLIL
EYRKIQKLKSTYVDAIPNMVNKNTKRVHASFNQTGTATGRLSSSDPNLQNLPGRSDEGKE
IRMAVKPQKDGWYILGADYSQIELRVLAHITEDPNLINAFKENKDIHLETAKKLFGVSEE
FITENMRRIGKMVNFAIVYGVSPYGLAKRTGLDVKDTKKMIEAYLDYYKNVQEYMANIKE
FAKKNGYVRTMFGRKRDIPQINSKDQNIRAEGERIAINTPIQGSAADIMKIAMIRIYERL
KDEKLQSMMILQVHDELVFEVPENEVEYVKKLVKEEMENAVKLRVPLLVDIYVEKYML
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagtatttctatttgatggtacaggattattgtacagagcatattttgcaata
gaccaatcattaacaactacatctggcgttcctacaaacgccctctatggtctttcaaga
atgcttgtaaaatttttgaaagaacatgtgattataaatgaagattattgtgctttcatg
ttagatgttaaaggtggaagcacatatcgtaaagaactttatgctgattacaaagcgcat
agaccagaaaccccagagccattgttaaaacaaatatctttagctgatgaactaatcgaa
ggctttggaataaagctaataaaagtccctggttatgaagctgacgatgtcatagcaact
ctcgcaaagaaatttgagaaagaaaagcaaaagtataacatttcggaaatcaatataatc
acaagcgacaaagatatgctccagctagttaacgaaaacatattcgtatggcgtgttgaa
aaaggtgttacagacttaaagaagtacacaaacaatgaaattatagaaaagtatggcata
acttctgaacaaataaaagattatttggctttagttggtgatgtatcagataatatacct
ggcgttagtggcataggtgagaaaacggctgcaaaaatccttaacgaatttggaagcgtt
gaaaatgcattgaagaatatctcaaaattacctgaaaaaataaggaatgctatcgaaaat
aacatagaagactttgaattgagcagaaagttggtagaattaaatacaaacgtcgaaata
aaaatagatatcgaagagttactttataaaggttacgatcaaaaaaagcttttgaatgtg
ctcaaaaaatttgaattttcaagtgtaataaaggaacttaatctttcagcagagcttact
aataaggttgaatataaagttattgaaaacgaacgagcgcttagtgacttacttgaaaca
ataatgaaatcaaaaaaaattgcattagatttggaaactacatcacttgatccattcgaa
ggaaaaattgtaggtatttctatagccgttgatgagggcaaagctttctacataccaatt
gcgcacgttggagctaagaatatacctatagaatctgttaaaaaatttctaagagattta
tttaacagtggtaaaactgttggcggtcacaacataaaatttgatcttaagttcatctca
agattgggaattgagccacaaataccatcttttgacagtatgattgaagcatatctgctt
aatccaaatgagaaaaaatttaaccttgatgaattatcattaaaattgctcggacacaaa
atgatttcatatgaagatttagtcaaagacacaattccactcttcgcaggagatttttct
tatattcctgtagacacggcagttaaatattcttgtgaagatgcagatatgtctcttagg
atacataatttgctccatcctttgatttattcaaatgaaatgaatgaattatatgaaaag
atagaattacctatgattttagtccttgcaaatttggaactaaatggtgtctattttgat
atacagtatctaaacaatttatcacaagaaatggacaaaaaacttttagcactttcgaat
cgaatctttgaaatcacaggtgaggcatttaacctaaattctccaaaacaacttggatac
atactatttgaaaaattaaagttaccaagtgtaaaatccacatcaaccggtgcgtattca
acggatgtcgaagtacttgaatatcttgccaacgaatacgaaattgcaaagcttattctt
gaatacagaaagatacaaaagttaaagagtacttacgttgacgcaattccgaatatggtc
aacaaaaatacaaaacgagtccatgcttcttttaatcaaacaggtacggcaaccggtaga
ttgagcagctctgaccccaatttacaaaatttacctggaagaagcgatgaaggaaaagaa
atccgaatggctgtgaaaccacaaaaagacggttggtatatattaggagctgattattca
caaatagaactacgtgtacttgcgcatataaccgaggatccaaatttaatcaatgcattc
aaagaaaacaaagatatccaccttgaaactgctaaaaaattattcggtgtcagtgaagaa
ttcataactgaaaacatgagaaggataggcaaaatggtcaattttgcgattgtatatggt
gtttcaccttatggacttgcaaaaagaacaggattggacgtaaaagatacgaaaaaaatg
atagaggcttaccttgattactataaaaatgttcaagaatacatggctaatataaaggaa
ttcgcaaagaaaaatggatatgtaagaactatgtttggaagaaaaagagatataccacaa
attaactcaaaagaccaaaatataagagcagaaggtgaacgaatagctattaatactcct
atccaaggcagtgctgccgacataatgaaaattgcgatgataaggatatatgaacgacta
aaagacgaaaaattgcaaagtatgatgatacttcaagtgcatgatgaacttgtctttgaa
gtaccagaaaacgaggttgaatatgttaaaaaacttgttaaagaagaaatggaaaatgca
gtgaaactaagagttccattacttgtagatatttacgtggagaagtatatgctttaa
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