Fervidobacterium nodosum: Fnod_0383
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Entry
Fnod_0383 CDS
T00579
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
fno
Fervidobacterium nodosum
Pathway
fno02020
Two-component system
fno02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Fnod_0383
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Fnod_0383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fno03021
]
Fnod_0383
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
fno02035
]
Fnod_0383
Transcription machinery [BR:
fno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Fnod_0383
Bacterial motility proteins [BR:
fno02035
]
Flagellar system
Flagellar assembly proteins
Stator
Fnod_0383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_24
HTH_3
DnaD_N
Rv2175c_wHTH
HTH_Crp_2
HTH_28
HTH_10
HTH_23
PMBR
HTH_5
MarR_2
HTH_37
HTH_WhiA
HTH_31
Sigma70_ECF
KORA
HTH_60
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ABS60248
UniProt:
A7HK15
LinkDB
All DBs
Position
416781..417482
Genome browser
AA seq
233 aa
AA seq
DB search
MLNKEMVIQEYIPMVTKIARDLKINLPYNVEIDDLIQEGVIALLQAAEKYDPRYGATFKT
FAYTRVKGAMIDYLRKLDYLPKNVRQDIKKFDRELLNFYEQNKRLPTYDEMSEILGIDVE
EVEEIYRELALKQSLNLDQYLFESDENSYGSIDIKSEENVKENAWKSILHEQLVEAINKL
DEKEKIILSMRFEHELSLKEIAEVLGVTESRVSQILGVILSKLRKMLRGDEDG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaggaaatggttatacaagagtacattccaatggtaacaaaaattgctcgt
gatttaaagattaatttaccgtacaacgttgagatagatgatcttattcaagaaggtgtt
atagcacttttacaagcagctgaaaagtatgatccaaggtatggcgcaacttttaaaaca
tttgcttacacaagagtgaaaggtgctatgattgactaccttagaaagcttgattacttg
ccaaagaatgtaagacaggatatcaaaaaatttgatagagaacttttgaacttttatgag
caaaataaaagattaccaacttacgatgaaatgtcagaaattcttggaatagatgtagaa
gaagttgaggagatttacagggaacttgctttaaagcaaagtctgaatcttgaccaatat
ctctttgaatcagatgaaaactcatatggaagtatcgatataaaaagcgaagaaaacgtt
aaagaaaatgcttggaagtccatacttcatgaacaattagttgaggcgataaataaatta
gatgaaaaagaaaagataatattaagtatgagatttgaacacgaactatctttaaaggaa
attgcggaagttcttggagttaccgaatctcgtgtatcccaaattcttggtgtcatactt
agtaagctccgcaaaatgcttagaggtgatgaggatggctga
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