Fervidobacterium nodosum: Fnod_0431
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Entry
Fnod_0431 CDS
T00579
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
fno
Fervidobacterium nodosum
Pathway
fno02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Fnod_0431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fno03021
]
Fnod_0431
Transcription machinery [BR:
fno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Fnod_0431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
NAGidase
Sigma70_r4_2
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ABS60296
UniProt:
A7HK63
LinkDB
All DBs
Position
complement(471275..472393)
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AA seq
372 aa
AA seq
DB search
MSKTVIKENEELQKKLEKLVELGKRKGYITYDDIDRTFPPGDADSLDSNFLDMVYETLEK
NKIEIRDTTDLMNIEEEVKAYLSESPEIFNSTEPKDLIKMYLRDIGKIRLLTPSEEKRLA
QRAQMGDQRAKEELIISNLRLVVSMAKRYLGKGLSFLDLIQEGSLGLIKAVEKFDWSKGY
KFSTYATWWIRQAITRAIADQARTIRVPVHMVETINKIQKIKREYVQEHGEEPSIEYIAE
QVGKPVDKIEEILQAAPETLSLETPVNEEDDSSMGDFIADESIGSPKKEAIRTLMREEID
KLLETLNDREKKVLKMRYGLYNGKPMTLEEVGQFFGVTRERIRQIEVKALRKLRHPSRSR
YLRLLQKLTEED
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaaaactgttattaaggagaacgaagagttacaaaagaaacttgaaaaattagta
gaacttggcaaaaggaaggggtatattacatacgatgatatcgataggacatttccacca
ggtgatgctgactcacttgatagcaactttttggatatggtatacgagaccctcgaaaag
aacaaaatagaaattagagatacaacggatcttatgaacatagaggaagaagttaaagct
tatctttcagaaagcccagaaatattcaacagcacagaaccaaaagatttaataaaaatg
tatctcagggatataggtaaaataaggcttttaacaccatctgaagaaaaaaggcttgct
caacgtgcacagatgggagatcaaagagccaaagaagaactaataatatcaaaccttaga
cttgttgtaagcatggcgaaaagatatcttggaaagggtttgtctttcttggaccttatc
caagaaggtagccttgggctgataaaagcggttgaaaaattcgattggtccaaagggtac
aagttttcaacttatgcaacatggtggataaggcaagctattactagggctatagcagac
caggcaagaacgataagggtacctgtacatatggttgaaaccataaacaagatacagaaa
ataaagcgcgaatatgttcaagaacatggtgaggaaccatcgattgaatatatcgccgaa
caagttggaaagcccgtagacaaaatcgaggaaatattgcaagcagctcccgagacactc
tccttagaaacacctgttaatgaagaagatgactcttcaatgggagatttcattgcggac
gaaagcataggttcacccaaaaaagaagcaattagaacacttatgagagaagaaatagat
aaattacttgaaactcttaatgatcgtgagaaaaaagtattaaaaatgagatacgggcta
tacaatggtaagcctatgaccctggaagaagttggtcaattttttggtgttacaagggaa
agaatcagacaaatagaagtcaaagcactcagaaaattgagacatccatcaagaagcaga
tatttaagattgctgcaaaaattaacagaggaagattga
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