Fervidobacterium nodosum: Fnod_0454
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Entry
Fnod_0454 CDS
T00579
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fno
Fervidobacterium nodosum
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fno03016
]
Fnod_0454
Enzymes [BR:
fno01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Fnod_0454
Transfer RNA biogenesis [BR:
fno03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Fnod_0454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABS60319
UniProt:
A7HK86
LinkDB
All DBs
Position
492376..493668
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AA seq
430 aa
AA seq
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MKVHIFTYGCQMNENDSEIVKQLLKDEGIELTDDENDADVVILNTCAVRKKSEEKVYSHI
GKLRKKGKKIGIMGCVAEKEKENLFKRGVSFVIGTRALTKVPDAVLNAKNGNKQIYLEDT
LDEIEYHKVETRSSNHHAWVTIIHGCDRFCTYCIVPYTRGREKSRPIDEVLKEVESLSQR
GYKEFTFLGQNVDAYGKDLRDGTSLAKLLKLASQIDNVKRLWFLTSYPTDFSLEIPKVML
ESEKVARSIHLPVQHGSDKILKAMNRRYTRQEYIDLINEIRKIVPDASISSDIIVGFPGE
NDEDFEATVELVKLLKFERLNLAVYSPREGTVAWKYLKDDVPYQVKVRRMSYLLNLQKTI
NKELNKSYLGKEVEVIVEAQAKNGLFYGRDIRNKIISFEANPESIGKNVIVKVNKISAGP
LYGEIKKILD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttcatatttttacttatggttgccagatgaatgaaaatgattcggaaatcgtt
aaacaacttttgaaggatgaaggtattgaactaaccgatgacgaaaatgatgctgatgtt
gtgattttaaatacgtgcgccgttagaaagaaatcagaagaaaaggtttacagtcatata
ggcaaattaagaaaaaaaggtaaaaaaattggaataatgggttgcgttgctgaaaaagaa
aaagaaaacctctttaaaagaggtgtttcttttgttataggtacgcgtgctcttacaaaa
gttcctgatgcagttttgaatgctaaaaatggaaacaaacaaatttatcttgaagatacg
ttggatgaaatcgagtatcataaagtcgaaacacgttcatcaaaccaccatgcttgggta
acaattatacacggttgtgatagattctgtacatattgtatagttccatacacacgtgga
agagaaaaatctagaccaatcgacgaggtacttaaagaggtagaatctctttcacaaaga
ggatacaaagagttcacgttccttggtcaaaacgtagatgcttacggaaaagatttaaga
gatggcacatctctcgcaaaactgcttaaattagcctcacaaattgataacgtcaaaaga
ctttggtttttgacatcttatccaacggacttttcacttgaaattccaaaggtgatgctc
gaaagcgaaaaagtcgcgcgttcaattcaccttccggtacaacacggaagtgataaaatt
ttgaaagctatgaacagaagatacacacggcaagaatacattgatttgattaacgaaatt
cgaaagatagtaccagatgcatcgatatcaagcgatataattgttggttttcctggtgaa
aatgatgaagattttgaagctactgtcgaacttgttaagttattgaaatttgaaagatta
aatttagcagtctattctccacgtgaaggtactgtcgcgtggaaatatttaaaagatgat
gtgccttatcaggttaaagtcagaaggatgtcgtatcttctaaaccttcagaaaactata
aataaggaactaaataaaagctaccttgggaaagaagttgaagttatcgtggaagcacaa
gcaaaaaatggcttgttctatggaagagatatcagaaataaaataatttcgtttgaagct
aacccggaatcgattggtaaaaatgtgattgtaaaagtgaataaaatatccgcagggcct
ttgtacggtgaaattaaaaaaatcttagactaa
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