Fervidobacterium nodosum: Fnod_0519
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Entry
Fnod_0519 CDS
T00579
Name
(GenBank) UvrD/REP helicase
Organism
fno
Fervidobacterium nodosum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_14
Cas_Cas4
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABS60382
UniProt:
A7HKE9
LinkDB
All DBs
Position
complement(572175..575567)
Genome browser
AA seq
1130 aa
AA seq
DB search
MQNLGKSVADIVRENPNCNYFISASAGTGKTYTLTNYYMGILEYYEKENNPDIVDGILAV
TFTNKAANEMKERIMNKVREKITSSSVSNLAYWKRVYSNMSRAVISTIDSFCRRVLIEQN
IYAGVDPNFTIINDLKQLKIIDSASRQAMEIAFKVYEDLEIPLSPMLSSERRKRIEGYIK
ELKEIKDSIIDLFELVGDVWRVKGFVEDIVTNWRLELRQSNVSKLLLDVMKKAGNSFRVL
RLISLIASELYEAETIDNFEYDFKGVLEKTIEVLNNNEEVRKYYQERFKYIIVDEFQDTN
ELQRMIFDFIHTDKNYIFYVGDRKQSIYRFRGADVSVFVKTMDEFEKRAKISPDKYRILS
LQTNYRSHEFLVDYFNKVSRDSIFRNEIYDMLSNLNGFNSNKPISEISDDEAKLYLHEAF
RLRYRDLYDKLWFLDEDISNAHIKKLESEVIPQIDFLNESISRVSYLSIVSLDEKVSPED
EANLVAMAIKNLVGKEITIFDKEKNDYVTRKVEYKDIAILSYKLAGIESIYRETFGKFNI
PLYVVKGRGFYKRPEIRAVISALSVIQNPNNDYNFVEFFLTPFVESTDFSPSFDKFKILH
KIVLNARKLRENGERISFFQSAKKLGKEDLPDYVSEMIELVQKYDELKYFLRPAEVLKGF
INESYYLAKLSKFPNSVQRLKNVKKLLDQATEFNQQASTFSELIRLLSKVEELQETEASE
VSEEDNVVKMMTVHASKGLEYNIVFLVNNNFNEMESDEVFFPSDDNGGRYIHIKRFIENY
KDKFNINKDEYKKLKGELEAELIYDETEILRKIYVAITRAKEMLFVVTYNTNSSRGKRGK
TAGQYLAHNEFKTITIDKKQIDEMVKSLSISEFSGEENKKLLDEEKIRKQIEDFSNIGYK
RYISPTLLYNITDEKSDKELVNELEVDFEENMPLFEGQEKQDILKIFEKNQEKQKRSKSE
VSLLLSSLLETSREVIEGKNIHRRLMSVQRYPDLLNLVERGELPEKILKADVIKYLFENS
DKVISEWRIAKSVVIDGKKYTLFGVPDRVFFKDGKIYVVDFKSSYLKDGSEEVEKYKFQL
QFYMYMLKDFGEIAGGYLVGARSGFVIRVERPGDDFIELLAKLIRNLEVI
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttggaaagtccgttgcagatatagttagagaaaatccaaattgcaattat
ttcatctcagcatctgctgggacaggtaaaacttacactttgacgaactattacatgggg
attttggaatactacgaaaaggagaataatccagatatagtcgatggtattttggcagtg
acgtttactaacaaagccgcaaacgaaatgaaagaaaggataatgaataaagtcagagaa
aagattacatcttcatcagtcagtaacttggcttattggaaacgtgtttattccaatatg
tccagagcggttatctcaacaatcgacagtttttgcagaagagtgttgattgagcaaaat
atctacgctggtgtcgacccgaattttacaattatcaacgatttaaaacaattgaaaatc
atcgatagcgcctcacggcaggctatggaaatcgcttttaaggtgtacgaagatttggaa
attccgctctccccaatgctttcaagcgaaagaaggaaaagaatagaaggatatataaaa
gaattgaaagaaataaaggattccattatcgacctttttgaattagttggagatgtttgg
agagtgaaaggttttgttgaggatatagttacaaactggaggcttgagcttagacagtcc
aacgttagtaaattactactggatgtgatgaaaaaagcaggtaattcttttagagttttg
aggctcattagtttaattgcctcagagctttacgaagcagagacaattgataactttgaa
tacgatttcaaaggcgtactggaaaagactatcgaagttttgaataataatgaagaagtt
agaaaatattatcaagagaggttcaaatatatcatagttgatgagttccaagacacaaat
gaactccagcgcatgatatttgattttatccacacggacaaaaattacatattctatgtc
ggagataggaaacagtcgatatacagattcaggggcgctgatgtttctgtttttgtaaag
acgatggatgaatttgagaaaagggcaaagatttcacctgataaatacaggatactttcg
ctccaaactaattacagatcgcatgaatttctcgttgattattttaacaaagtttcgagg
gattctatatttagaaatgaaatctacgatatgctttctaatttaaatggttttaattct
aataagccgatatctgaaatatccgatgatgaagcaaaactttatctgcacgaagctttt
aggttgcgctatcgggacttgtacgataaactttggttcttagatgaagacatttcaaat
gcacatattaaaaagttagaaagtgaagttattccacagattgattttctcaacgagagc
ataagtagggtttcctacttaagtatagtatcactcgatgaaaaagtttctcccgaagac
gaggcaaatttggttgcaatggctattaaaaatttagttggcaaggagattactattttc
gataaagagaagaatgattacgtaacaagaaaagtggagtacaaagacatagctatctta
agttacaaattagcgggtattgaatcgatatacagagaaacttttggtaaattcaatatc
ccactttatgttgtaaaagggcgaggattttacaaacgccctgaaataagagcagttatt
tccgcgctttccgtgattcaaaatcctaacaatgactataacttcgttgaatttttcctt
acgccttttgtcgaatcaacagatttctcaccatctttcgacaaattcaaaatattgcac
aaaatagttttaaacgcaagaaaattaagggaaaacggtgagagaatatcattcttccaa
tcagctaaaaaacttggcaaagaagatttgccagactacgtttccgaaatgatcgaactt
gtgcaaaagtacgatgaattgaaatactttttaagaccagccgaggttttgaaaggattc
atcaacgagagttattacttagctaaactttcgaaatttccaaacagtgtccaaagattg
aaaaacgttaagaaattgcttgaccaagctacggaatttaaccaacaggcgtcgacattc
tccgagctaataagattgctttcaaaagtggaggaattacaagagaccgaggcttccgaa
gtttccgaagaagacaacgtcgttaagatgatgacagtgcatgcttcaaaaggacttgag
tacaacatagttttccttgttaacaataattttaatgagatggaatctgatgaggtattc
ttcccatcggatgacaatggaggaaggtatattcatatcaaaaggttcatagagaattat
aaggataagtttaatataaacaaggatgagtataagaaattaaagggagaattggaagca
gagttaatatacgatgagactgagatactgcgaaagatatacgtggctataaccagggca
aaagagatgttatttgtggtaacgtacaatactaatagctctagggggaaaagaggaaaa
actgctggacaataccttgcacataatgagtttaaaactattacaatagacaaaaagcaa
atcgatgaaatggtaaaatcgctgagtatttctgaattttcaggggaagagaataaaaaa
ttgctagacgaggaaaagataagaaaacagatagaagatttttcgaatattgggtacaaa
aggtacatatcaccaactcttttgtacaacattacagatgagaagagtgataaagagttg
gttaacgaactagaggtcgattttgaagaaaatatgcctcttttcgaaggtcaagaaaaa
caagatatattaaaaattttcgaaaaaaatcaagaaaaacaaaagagaagtaaaagtgag
gtaagtctacttctatcttcgttacttgaaacctcgagggaagttatcgaagggaagaat
atacatagaaggttgatgagtgttcaaagatatccagatttgttgaatcttgtcgaaaga
ggagagttgcccgagaagatattgaaagcggatgtaatcaaatatctatttgaaaacagt
gataaggttatttccgaatggagaatcgcaaaatcggtggttatagatggtaagaaatat
acactctttggtgtgccagatagggtgtttttcaaagatggaaagatatacgttgttgat
tttaaatcatcgtatctaaaggatggttctgaagaagttgagaagtacaaattccagctc
caattttatatgtacatgcttaaagatttcggagaaattgctggagggtatttagtcggc
gcaagaagtgggttcgttattagagttgaaagacctggcgatgatttcattgaattactg
gcaaagctgataagaaatttagaggtgatatag
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