Fervidobacterium nodosum: Fnod_0721
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Entry
Fnod_0721 CDS
T00579
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fno
Fervidobacterium nodosum
Pathway
fno03420
Nucleotide excision repair
fno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Fnod_0721
03430 Mismatch repair
Fnod_0721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fno03400
]
Fnod_0721
Enzymes [BR:
fno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Fnod_0721
DNA repair and recombination proteins [BR:
fno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fnod_0721
MMR (mismatch excision repair)
Other MMR factors
Fnod_0721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
DEAD
DUF4032
Motif
Other DBs
NCBI-ProteinID:
ABS60576
UniProt:
A7HKZ3
LinkDB
All DBs
Position
complement(784332..786302)
Genome browser
AA seq
656 aa
AA seq
DB search
MGDDKIRIYELKKEDSKDSNIEDFFKELDSEQRRAVMESNGKSVVIAGPGSGKTRVITYK
IAYLLLNGVMPSEILLVTFTRAAAREMIERAQIVTKKDLSDMMAGTFHHVCNLLLRKYGS
SIGLKSNFTILDEEDAKDLMKIARSRYVTSKQMNKAFPTHSELYSIYSYMVNTFLTPYEV
VIKRAKRWIQVVDVIEKVFQEYALEKERQNVLDYDDLLLKTLQMLEGNEELRRRISSRFK
WILVDEFQDTNILQLKIVQHLSEVHGNLFVVADDAQSIYSFRGARFENVKEVMDGANVFK
IQTNYRSTDKIVELVNSMIPRNSVPKKLRAIRTSVQKPIVVNTYDHFDEAYFVAQRINEI
VDEGFDYSDIAVLYRAHAHSLELQLELTKRNIPFKVLSGLRFTETAHVKDVVAFLKILLN
PYDVISWMRVLKLVDNVGNVTAEKIISRITSESNEEKSPLDLFLEMKIKSSNVENLKSAI
FNSIDKAPSFQIKNFYEQFYQDILEYHYTDFRDREEDIERLIEMASYYDNVEDFLNDILI
SEDVRTNESNDFSDDKGKVTLTTIHQAKGLEWKVVFVIGVNPGDFPHFLALKDNTLDEEE
RLFYVAITRAKDILYITHSTLPRREYFYNSFNSDKQIDRDFVKDIPRDLAEFWKVR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgataagataagaatttacgaattgaaaaaagaagattcaaaagattctaat
atagaagatttttttaaagagcttgatagcgaacaacgccgagcggttatggaatcaaat
gggaaatcggttgttatcgctggacctggtagtggaaagacaagagtcattacttacaaa
attgcttaccttctacttaatggtgtaatgccttctgaaattttacttgttacgtttaca
agagctgctgctcgtgaaatgatagaacgggcgcaaatagtaacaaagaaagatttgtct
gatatgatggcaggtacattccatcatgtgtgtaatttacttttaagaaaatatggaagc
tcaattggtttgaaatcgaattttacgatattagatgaagaagatgcgaaggatttaatg
aaaattgcaaggagtagatacgttacttcgaaacagatgaataaagcttttccaacccac
agcgagttatattccatttattcatacatggttaacacatttcttacaccatatgaagtt
gtaattaagagggcaaaaaggtggatacaagttgtagatgttatagagaaagtcttccag
gaatacgctcttgagaaagagagacaaaatgttttagattacgatgacttgctgttgaaa
actctgcaaatgctagaaggtaatgaagaattaagaaggcgtatatcttcgaggtttaaa
tggatactcgttgatgagttccaagataccaatattcttcagttaaaaattgttcagcat
ctttcagaagtacatggaaatttatttgtcgttgctgacgatgcgcagagtatttattca
tttagaggtgctagatttgagaatgtaaaagaggtaatggatggtgcaaatgtttttaag
atacaaaccaattacaggagcacagacaaaattgttgagcttgtaaattcaatgattcca
agaaattcggtacctaaaaagttgagagcaatacgaacaagtgttcaaaaacctatagtt
gtaaatacttatgaccattttgatgaagcatattttgttgcgcagagaattaatgaaatc
gttgatgaaggctttgattacagtgatattgcggttttgtaccgtgcgcacgctcattca
ctggaattacaacttgagcttacaaagagaaacataccatttaaagtactatcaggatta
agatttaccgaaacggcacacgtgaaagatgttgtggctttcttaaaaattcttttaaat
ccatatgatgtaatttcttggatgagagttttaaaattggtagataatgtaggtaatgta
accgcggaaaagataataagtcgtataacaagcgaaagcaacgaggaaaaatcaccattg
gatttgttcttggaaatgaagataaagagctcaaacgttgagaatttaaaaagcgcaatt
ttcaattcgatagataaagctccaagcttccagataaaaaatttttacgagcaattttat
caggatattttagaataccattacacagatttcagggatagagaagaagatatcgaaaga
ttaatagaaatggcgagttactacgataacgtggaagattttttaaacgatattttaatc
tcagaagatgttagaactaatgaatctaacgacttttctgatgataaaggaaaagttacg
ctaactacaattcatcaagctaaaggtctcgaatggaaagttgtttttgtcataggtgtt
aatccgggagattttccacacttcttagctttaaaagataatacattagatgaagaggag
agattattttatgttgcaataacccgtgccaaagatattctttacataactcattcaacg
ctaccaagaagagaatatttttacaattcattcaatagtgataaacaaatcgacagagat
tttgttaaagatattcctagggatttggcggaattttggaaggtaagataa
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